Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0569 ATGGACATGCTCATCATGGACGACCCTGATTTCCTCGACTTCTCCGATCACAGCATCACAACCACCCTTTCCTCCCACGAAGACTGCAACAAGAACAACAACAACCTCTGGTCCCCTCTTATCGACTGGGAATCCCTCAACGCATGCGAAAATGACTTCCAAACCCTAATTGACTCCGTCATGATCGACAACAACGACGACGTTTTGACCCCAGAAGAATCAGATCAAAGCGCCGCCGAAGAATCAGAATCAGACTCCACCGGCGGCGACGAGAGGGGCCTCCGCCTGCTGCACCTCCTCATGGCGGCGGCGGAGGCCCTCAGCTCCGGCACAGAGAGCCACGACCTGGCTCGAGCGATATTGGTTCGGCTCAACGAGTTGGTGTCCCCCACCCAGGGCACCAACATCGAACGTCTCGCGGCGCACTTTAGCCACGCCCTCCATTCCCTGCTAAACGGCACCGCAAGTGCGCACACACCCCCCATCGACACCCTCACCGCGTTCCAACTCCTCCAAGACATGTCCCCATACATCAAGTTCGCACACTTCACCGCAAACCAAGCCATCTTAGAAGCCGTGGCCCATGAAAAAAGAGTCCACATAATCGACTATGACATAACCGAAGGGGCCCAATGGGCCTCATTAATTCAAGCTCTTTCCTCAGCAGGCCCACCAGGCCCACACCTCCGCATCACCGCATTGTCCAGAGGCGGCGGTGGAGGAGGAAATTCCTCCTCTGCCTCTGGACAGAGATCTATAGCCTCCGTCCAAGAAACTGGAAGGAGGCTAACGGCCTTCGCGGCCTCTGTGGGGCAACCCTTCTCCTTTCACCACTCTCGGCTGGACCCCGACGAAACGTTTCGCCCTTCTAATCTAAAGCTGGTTCGGGGAGAAGCTTTGGTGTTCAACTGCATGCTGCATTTGCCGCACCTCAACTTCCGAGCCTCAGGTTCGGTTGGTTCGTTTTTAAGAGGCGCGAAAGAGTTGAACTCGAGGCTGGTGGTGCTTGTGGAGGAGGAAATGGGCTGTGTTGCTGCGGATTCGGGCTTTGTGGGCTTTTTTATGGACTCGCTGCACCACTATTCGGCGGTGTTCGACTCGCTTGAGGTTGGGTTTCCCATGCAGACATGGGCCCGAGCTTTGGTGGAGAAAGTGTTTTTGGGCCCGAGAATAACGGGCTCGGTGGCCCGGATGTATGGGAGTGGTACTGAGGAGGAGAAAGTGTCGTGGGGGGAGTGGTTGGGTGCGGCGGGTTTCAGGGGAGTTCCCCTGAGCTTCGCTAATCATTGCCAAGCGAACCTTTTGTTGGGTTTGTTTAACGATGGATATAGGGTGGAGGAGTTGGAGAATAATAGGTTGGTGTTGGGTTGGAAATCACGGCGTTTGCTTTCGGCTTCTGTTTGGAGTTCTAACTCTTGA 1419 0.5539 MDMLIMDDPDFLDFSDHSITTTLSSHEDCNKNNNNLWSPLIDWESLNACENDFQTLIDSVMIDNNDDVLTPEESDQSAAEESESDSTGGDERGLRLLHLLMAAAEALSSGTESHDLARAILVRLNELVSPTQGTNIERLAAHFSHALHSLLNGTASAHTPPIDTLTAFQLLQDMSPYIKFAHFTANQAILEAVAHEKRVHIIDYDITEGAQWASLIQALSSAGPPGPHLRITALSRGGGGGGNSSSASGQRSIASVQETGRRLTAFAASVGQPFSFHHSRLDPDETFRPSNLKLVRGEALVFNCMLHLPHLNFRASGSVGSFLRGAKELNSRLVVLVEEEMGCVAADSGFVGFFMDSLHHYSAVFDSLEVGFPMQTWARALVEKVFLGPRITGSVARMYGSGTEEEKVSWGEWLGAAGFRGVPLSFANHCQANLLLGLFNDGYRVEELENNRLVLGWKSRRLLSASVWSSNS* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0569 472 ProSiteProfiles GRAS family profile. 87 469 IPR005202 -
Gso13g0569 472 MobiDBLite consensus disorder prediction 227 253 - -
Gso13g0569 472 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 17 469 IPR005202 -
Gso13g0569 472 MobiDBLite consensus disorder prediction 238 253 - -
Gso13g0569 472 MobiDBLite consensus disorder prediction 66 91 - -
Gso13g0569 472 PANTHER SCARECROW-LIKE PROTEIN 26 17 469 IPR030028 -
Gso13g0569 472 Pfam GRAS domain family 96 468 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0569 Gso-Chr13 19009847 19011588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0569 93 471 GRAS Transcription Factor Family AT5G41920 35.787 1.11e-53 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso13g0569 GRAS 6e-95 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0569 - - gmx:100816317 889.412