Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0563 ATGGCGAGTCCTGATTCAAAATGTCCAGCACCAATGAAGGCCACGTCCAATGGGGCATTCCAACATGAAAATCCCTTGGATTATGCGCTTCCCCTATTAATCCTCCAGATATGTGTGGTTGTGGTCTTTACCAGATTCCTTGCATTCATTTGCAAACCTCTGAGACAACCCCGAGTAATTGCAGAGGTCATTGGAGGAATACTACTTGGACCATCTGCAATGGGAAGGAGTGAGAAATTCCTGAACACAATTTTCCCCAAGAGAAGCTTAACTGTGCTTGAAACTGTGGCCAACATTGGTCTTCTATTCTTCTTGTTTTTGGTGGGTCTTGAGCTTGACTTGCGTTCTATACGCAAAACTGGTCACAAGGCCTTATTCATTGCTCTTTCAGGCATCACATTCCCTTTTATACTTGGCATTGGCACATCATATGCGCTTCGAGCCACCATATCGAAGAATGCTAATCCAACCTCGTTCCTTGTTTTCATGGGTGTTGCTCTCTCGATCACCGCATTCCCCGTCCTTGCGCGAATCCTCGCTGAGCTAAAACTCCTCACAACCAATGTCGGTCGCATAGCAATGTCAGCAGCTGCTATCAATGATGTTGCAGCATGGATACTACTTGCACTTGCCATAGCACTTTCTGGCTCCAACACATCCCCACTTGTTTCCTTATGGGTTATACTTTGTGCTGCTGGCTTTGTCCTCTTTGCTATGTTTGCCATAAGTCCCTTACTTGGAATGATGGCTAAGCGTTCGCCCGAGGGCGAACCGGTGCAGGAGATCTACATATGCATCACCATGACACTAGTCCTGGCTTGTGGTTTCATCACCGATACTATCGGCATTCATGCGCTCTTTGGAGCTTTTGTGGTTGGCATTGTTATGCCTAAGGATGGTCCCTTTGCAGGGGCGTTGATTGAGAAGATAGAGGACCTTGTGATGAGCCTCTTCTTGCCTCTCTATTTTGTGTCAAGTGGTTTGAAGACTGATGTGGCAAGTATAAGTGGAGCTCTTTCTTGGGGTATGCTAGTGCTTGTTATTTTCACTGCTTGCTTTGGAAAGATCATTGGCACATTCCTGGTGTCACTGTTATGTAAGGTTCCTTTTAGAGAAGCCTTGGCCCTTGGATTTCTCATGAACACTAAGGGCTTGGTGGAGCTAATTGTTCTCAACATTGGCAAGGATCGCAAGGTACTAAACGACCAAGCATTTGCAATTTGTGTATTAATGGCATTGTTCACCACTTTCATCACGACCCCAATAGTGATGGCAGTGTACAAACCAGCTCGGACAGGATCACGTTACACGCATAAAACAGTTCAACGCAACGATCCTAACACCGAGCTACGAGTGTTGGCATGCTTCCATAGTACCCGCAATATTCCCACCTTGATCAATCTAATAGAGTCATCACGAGGAACCAAAAAGAGGGCAAAGCTATGTGTCTATGCAATGCACTTGATGGAGCTCTCGGAGCGACCATCAGCGATCACAATGGTTCATACGGCGCGCAACAATGGCATGCCCTTTTGGAACAAAAAGCATGACAATAGAGACCAAGTGGTGATTGCATTTCAGGCTTATGGCCATCTAAGTAGTGTCAATGTTCGCCCTATGACAGCCATATCAGCTTTCAGCAACATCCATGAAGACATTTGCACCAGTGCGCACCAAAAGAGAGCAGCAATCATATTCCTCCCATTCCACAAACACCAACGCTTCGACGGGACAATGGAGTCGGTAGGAAACTCGTTGCGCGCGATGAACGGCCTAGTTCTCAGCCATGCTCCTTGCTCAGTCGGAATCTTGGTTGATCGCGGCCTTGGTGGTACAAGCCAAGTCCAAGCCAGTGATGTGTCATACAAGGTTGTTGTAGGTTTCTTTGGTGGGCGAGACGACCGCGAAGCACTCGCCTATGGGATGAGAATGGCTGAGCATCCTGGTGTTTCAATCACTGTTGTGAAGTTTGTAGTTCCACCTGGGATGACATTGGCCTTTGGTGCCAAATTGATTGGTGTAACAGCAGACAAGGATAGAAAGGTAATTAAAGTGGCTGAAGGAACTACCACTGATGTAGAGAAACAAGAGGATGAGCACTTTTGGTCTGAGTTCTTAGGTGTGTGTTGCAAAAATGCAGAATCAATAATGTATGAGGAAAGGTTGGTAGAAAGCAAAGAAGATATTCTGACAACAATGAGGGAGATGAATAAGAGCAATCTAATTTTGGTAGGTAGAATGCCCCCGGTGGTACCTTTGGTAGACACAAGTGATTGCCCTGAACTTGGTCCTGTTGGAAGCTACTTGGCTTCTTCTGAGTTCTCCACTTCTGCATCAGTTATAGTGTTTCAGCAATACAATCCCAAAACAGATGTTTATCCATTGGTTATGGAGATTTCTGATTACTTGAACATGCCAGACACGCCACCACATTCTCCGTAG 2442 0.4603 MASPDSKCPAPMKATSNGAFQHENPLDYALPLLILQICVVVVFTRFLAFICKPLRQPRVIAEVIGGILLGPSAMGRSEKFLNTIFPKRSLTVLETVANIGLLFFLFLVGLELDLRSIRKTGHKALFIALSGITFPFILGIGTSYALRATISKNANPTSFLVFMGVALSITAFPVLARILAELKLLTTNVGRIAMSAAAINDVAAWILLALAIALSGSNTSPLVSLWVILCAAGFVLFAMFAISPLLGMMAKRSPEGEPVQEIYICITMTLVLACGFITDTIGIHALFGAFVVGIVMPKDGPFAGALIEKIEDLVMSLFLPLYFVSSGLKTDVASISGALSWGMLVLVIFTACFGKIIGTFLVSLLCKVPFREALALGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVLMALFTTFITTPIVMAVYKPARTGSRYTHKTVQRNDPNTELRVLACFHSTRNIPTLINLIESSRGTKKRAKLCVYAMHLMELSERPSAITMVHTARNNGMPFWNKKHDNRDQVVIAFQAYGHLSSVNVRPMTAISAFSNIHEDICTSAHQKRAAIIFLPFHKHQRFDGTMESVGNSLRAMNGLVLSHAPCSVGILVDRGLGGTSQVQASDVSYKVVVGFFGGRDDREALAYGMRMAEHPGVSITVVKFVVPPGMTLAFGAKLIGVTADKDRKVIKVAEGTTTDVEKQEDEHFWSEFLGVCCKNAESIMYEERLVESKEDILTTMREMNKSNLILVGRMPPVVPLVDTSDCPELGPVGSYLASSEFSTSASVIVFQQYNPKTDVYPLVMEISDYLNMPDTPPHSP* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0563 813 Gene3D - 32 433 IPR038770 -
Gso13g0563 813 PANTHER CATION/H + ANTIPORTER 1 812 - -
Gso13g0563 813 Pfam Sodium/hydrogen exchanger family 39 422 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso13g0563 813 PANTHER CATION/H+ EXCHANGER 3 1 812 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0563 Gso-Chr13 18886728 18890488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0563 1 802 Antiporter Super Family AT3G17630 69.030 0.0 1090
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0563 - - gmx:100818975 1575.84