Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0561 ATGGAGTGTTGTAAGAGGGTATATGAGTGGTTATGCAATTCAAAATCATACTTGATAATATTGAGCTTGCAATTTGGCTCCGCCGGCATGTACCTTATCACCATGGATGCTCTCAATAAGGGCATGAGTCATTATGTGTTTGTCGTTTACCGCAATGTCATCGCCACTATTGCTCTTGGCCCTTTCGCATTTTTTCTTGAAAGGAAAGTTAGGCCCAAGATGACAGTTCGGATATTTTCAGAAATTATGGCAGTGGCTTTTGTCGAGATAATACTTGATCAATGCTTCACGTTCCTTGGTATGAAGTACACATCAGCATCATTTGCGTCTGCGGTGATGAATTCTGTACCCTCCATTACCTTTGTACTCGCAATCATTTTTCGATTGGAGAGCATGAACTTGAAGGAGCTAGGATGTTTAGCCAAAGTGATTGGCACTGCAGTTAGTCTTGGAGGTGCTTTTCTAATGGCTCTGTACAAAGGTCCTGTTGTTAACATTGCAGACTCTTCTGCCAGCCACGTGGGACGGCCTGATAATGTGAACGACCCTTCTGGCAGTCACTGGCTTATTGGTGCTTGTTTTCTCCTCATAGGTTGTGCTGGCTTCTCTGCTTTCTACATATTGCAAGCTATAACATTGAGAAAGTACCCAGCAGAGATGTCCCTAGCCACCTGGGTTTGCTTTGTAGGTGCACTTCAAAGCAGCGCAGTTAGTTTTTTCATGGAACGCAATAGCCCTCATGTCTGGTCTCTAGCATGGGATTCTAGGCTTGTAGCTTATGCATACTCGGGAATAGTAACATCAGCAATCCAATTTTACGTGCAAGGCATGGTTATTAAAACCACGGGGCCAGTGTTTGTGACTGCATTTAATCCCCTGCGTATGATCATAGTCACGGCCTTGGCCTGCATTGTTCTCTCAGAGAAACTCCATCTTGGAAGCATTATTGGAGGAGTAGTGGTGGTAATTGGTCTCTATCTAGTAGTGTGGGGCAAAGCTAAAGAACAGAAACATCTCATGCCACCATCCCCTGAAAAGGTCACCCTGCAACGCCATCAACAGCTACCAGTTACTGTACCCATAAGTGATGATGCAAATGATAATAACAAACCTCAATTGGTCATAATTGAAGATAGAAACATTGGGCCAGAACATTGA 1158 0.4387 MECCKRVYEWLCNSKSYLIILSLQFGSAGMYLITMDALNKGMSHYVFVVYRNVIATIALGPFAFFLERKVRPKMTVRIFSEIMAVAFVEIILDQCFTFLGMKYTSASFASAVMNSVPSITFVLAIIFRLESMNLKELGCLAKVIGTAVSLGGAFLMALYKGPVVNIADSSASHVGRPDNVNDPSGSHWLIGACFLLIGCAGFSAFYILQAITLRKYPAEMSLATWVCFVGALQSSAVSFFMERNSPHVWSLAWDSRLVAYAYSGIVTSAIQFYVQGMVIKTTGPVFVTAFNPLRMIIVTALACIVLSEKLHLGSIIGGVVVVIGLYLVVWGKAKEQKHLMPPSPEKVTLQRHQQLPVTVPISDDANDNNKPQLVIIEDRNIGPEH* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0561 385 PANTHER WAT1-RELATED PROTEIN 11 363 - -
Gso13g0561 385 Pfam EamA-like transporter family 27 156 IPR000620 GO:0016020|GO:0016021
Gso13g0561 385 Pfam EamA-like transporter family 190 329 IPR000620 GO:0016020|GO:0016021
Gso13g0561 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
Gso13g0561 385 PANTHER WAT1-RELATED PROTEIN 11 363 IPR030184 GO:0016021|GO:0022857
Gso13g0561 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 226 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0561 Gso-Chr13 18809523 18815791 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0561 15 358 Nodulin-like Gene Family AT1G44800 45.665 3.23e-110 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0561 - - gmx:100813852 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1164 14 26997326 27003591 Gso13g0561 13 18809523 18815791 GST