Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0560 ATGGAGGATCAAAATGCATCATCTAATGGATTGGGCAAGGTGTTCCACAAGGTTAAGCCCTACCTTGCTATGATGTCCCTTCAGTTTGGCTACTCCGGAATGTACATCATCACCATGGTTTCTTTCAAGCATGGCATGAGCCATTGGGTACTCTCCGTGTACCGTCATATAGTTGCCACTCTCATCATGGCCCCTTTTGCATTTGTCCTTGAAAGAAAAATACGGCCAAAGATGACTCTCCCGGTGTTCCTGAGGCTTGCGGCTCTCGGTTTCCTTGAGCCAGTGCTTGATCAAAACTTGTACAACATGGGAATGAAGAACACCTCAACAACGTTTGCATCGGCCACCGTTAATGTCATGCCAGCCATTACTTTTATAATGGCACTGATTTGCAGGTTAGAGACAGTGAACTTGAGAAAAATACCCAGCGTAGCCAAGGTAGTTGGAACAGCAGTAACAGTCTCAGGAGCTATGGTTATGACTTTGTACAAAGGCCCGGCTCTTCAGTTCATAAAGGGACAAGCAGCAACCCACCATGAAAGTGGCAACAGCACACAACCCTCTGAACAAAACTGGGTGCTTGGCACAGTAGAGCTCATTGCAAGTTGTGGTGGTTGGGCTAGCTTCTTTATCTTGCAATCTTTCACTTTGAAGATGTACCCGGCAGAGCTCTCGGTCACAGCTTGGATTTGCTTTTTGGGCATTTTTGAGGGTGCAATTGCGACCCTTATATTTGAACGTGACATGAGCGTGTGGTCAATAGGCATGGACTCAAGGCTCCTTGCTTGTGTTTATTCTGGTGTGGTATGCTCTGGAATGGCATACTATGTACAAGGAGTTGTGACAAGGGAACGTGGACCCGTGTTTGTTACATCTTTCAGCCCTCTCTGTATGATTATCACTGCTGCATTGGGATCCATTGTCTTGGCTGAGCAAGTTTATATGGGAAGTGTAATTGGAGCTATTATCATTGTGAGTGGACTTTACACCGTGGTATGGGGAAAAAGCAAAGACAAACTGAACAACAAAACCAACGAAGGAAACAGTGAGGGCCACGAATTGCCAATTAAGGACGGTACAAAATCAGGATCAGACATTTTTGACAGTATTGAGATCAATGTTCCTTCTGGGGCAGGAAAAAATGTGCTTCTTCCATCAGCAAGAACATAG 1170 0.4538 MEDQNASSNGLGKVFHKVKPYLAMMSLQFGYSGMYIITMVSFKHGMSHWVLSVYRHIVATLIMAPFAFVLERKIRPKMTLPVFLRLAALGFLEPVLDQNLYNMGMKNTSTTFASATVNVMPAITFIMALICRLETVNLRKIPSVAKVVGTAVTVSGAMVMTLYKGPALQFIKGQAATHHESGNSTQPSEQNWVLGTVELIASCGGWASFFILQSFTLKMYPAELSVTAWICFLGIFEGAIATLIFERDMSVWSIGMDSRLLACVYSGVVCSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSIVLAEQVYMGSVIGAIIIVSGLYTVVWGKSKDKLNNKTNEGNSEGHELPIKDGTKSGSDIFDSIEINVPSGAGKNVLLPSART* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0560 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 164 - -
Gso13g0560 389 PANTHER WAT1-RELATED PROTEIN 14 358 - -
Gso13g0560 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 337 - -
Gso13g0560 389 PANTHER WAT1-RELATED PROTEIN 14 358 IPR030184 GO:0016021|GO:0022857
Gso13g0560 389 Pfam EamA-like transporter family 199 332 IPR000620 GO:0016020|GO:0016021
Gso13g0560 389 Pfam EamA-like transporter family 32 158 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0560 Gso-Chr13 18789206 18794159 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0560 12 366 Nodulin-like Gene Family AT1G44800 61.625 2.04e-164 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0560 - - gmx:100808282 763.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1167 14 27049536 27054503 Gso13g0560 13 18789206 18794159 GST