Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0541 ATGGAAGTAATGTGTGGTGCCAAAGTTGGCAATATGGTCCATAAGGCCAAGCCTTATGTGTTAACTGTGGGGTTGCAATTTGGGATGGCTGGGACATACCTCTTCACCATGGCCAGTTTGAACCATGGAATGAGCCGTTTGGTGTTCATTGTGTATCGCAATGCCATTGCTGCATTGGCCCTTGCTCCCTTTGCCTTGATCTTTGAAAGGAAAGTTAGACCAAAGATGACATGGACTGTCTTCATACAGATATTAGTACTTGGATTTCTTGAGCCAGTGGTTGACCAAGGATTCACTTTCTTGGGGATGCAATACACTTCAGCTTCCTTTGCATCCGCTGTTATGAATGCCGTGCCCTCTGTAACCTTTGTGCTTGCAGTAATTTTCAGGTTAGAGCATATAAAAATAAGGGAATTACGCAGTCAAGCGAAAGTAATTGGAACCTTAGTAACCTTTGCTGGGGCTTTGTTAATGACACTATACAAAGGCCCTCAATTCGACCTATTTCATCATTCAAACACAACCCACCAACAAGGTGGAAGCCACACTCAGAATCACTCACACTGGGTCGCAGGAACTCTCTTCATTTGCCTGGGTTGCCTGGCTTGGTCTTCCTTCTACATATTGCAGTCCATAACGGTGAAAAGGTACCCTGCGGAACTATCACTCTCATCGTTGATATGCTTGGCGGGTGCTTTGCAAAGTGCCGTGGTTGCTCTGATTGCAGATCATAACCCTCGAGCATGGGCTATCGGTTTTGACTACAGCCTCTACGGTCCTCTATACACTGGAATAATGAGTTCAGGAATAGCATATTATATACAAGGGTTGGTAATGCAAAGCAGAGGTCCAGTGTTTGTAACATCTTTCAATCCTCTTTGCATGATCATTGTTACAGCTTTGGGCTCCTTCCTTCTAGGAGAACACCTCTACTTGGGAAGCATCATTGGAGGCATCATAATCGCAGTGGGTCTATACTCTGTGGTGTGGGGAAAAGGCAAAGACTATAAAGATGACACGTCATCACCAGCAACAACAAAAGAAACAGAAACAATGCAGCTTCCAATTACCTTACCAAATAATAAATAA 1089 0.4417 MEVMCGAKVGNMVHKAKPYVLTVGLQFGMAGTYLFTMASLNHGMSRLVFIVYRNAIAALALAPFALIFERKVRPKMTWTVFIQILVLGFLEPVVDQGFTFLGMQYTSASFASAVMNAVPSVTFVLAVIFRLEHIKIRELRSQAKVIGTLVTFAGALLMTLYKGPQFDLFHHSNTTHQQGGSHTQNHSHWVAGTLFICLGCLAWSSFYILQSITVKRYPAELSLSSLICLAGALQSAVVALIADHNPRAWAIGFDYSLYGPLYTGIMSSGIAYYIQGLVMQSRGPVFVTSFNPLCMIIVTALGSFLLGEHLYLGSIIGGIIIAVGLYSVVWGKGKDYKDDTSSPATTKETETMQLPITLPNNK* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0541 362 PANTHER WAT1-RELATED PROTEIN 12 354 IPR030184 GO:0016021|GO:0022857
Gso13g0541 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 334 - -
Gso13g0541 362 Pfam EamA-like transporter family 192 329 IPR000620 GO:0016020|GO:0016021
Gso13g0541 362 Pfam EamA-like transporter family 30 159 IPR000620 GO:0016020|GO:0016021
Gso13g0541 362 PANTHER WAT1-RELATED PROTEIN 12 354 - -
Gso13g0541 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0541 Gso-Chr13 18270323 18275799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0541 10 357 Nodulin-like Gene Family AT1G44800 48.851 3.53e-121 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0541 - - gmx:100782997 702.59