Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0533 ATGTGGTGGCACCGCCGAAGCCAGTGGGTACCCCTTTTTGGAGTTGTCGTAACACGGCTGTGTTTTGAAGGATTCAGGAATCAAATGTTGAATGCTATTAAAGGCTTCTCAAGATCACCTCAAAATGGATTGTTCATAAATTCATGTTTTGCTCACTGCCAATCTGAGAGGCAGGATACATGGTTTGCTGACAATTCTCCTGTCATTGGGAACAAGGTACAAATGAAGCAGTCAAGCCAAACCAAAATGAAGCAGCAACAAGTCCAAATGATAGCATCAATCTATTTCACAGGCTTTTGTTTCCTGTGTAACTTAATTAGGAATGAGTTATTTCGCCAGCAGTTAGGTGGAGATTTTGAGGAGGAAAATGGAGGGATTGTCAAAGGGCATATTATTACAGAGAATGGAGGAAGAGTATAA 420 0.4119 MWWHRRSQWVPLFGVVVTRLCFEGFRNQMLNAIKGFSRSPQNGLFINSCFAHCQSERQDTWFADNSPVIGNKVQMKQSSQTKMKQQQVQMIASIYFTGFCFLCNLIRNELFRQQLGGDFEEENGGIVKGHIITENGGRV* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0533 139 Pfam Pectinacetylesterase 22 74 IPR004963 GO:0016787
Gso13g0533 139 PANTHER PECTIN ACETYLESTERASE 22 73 - -
Gso13g0533 139 PANTHER NOTUM-RELATED 22 73 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0533 Gso-Chr13 18034262 18040619 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0533 22 95 Carbohydrate Esterase AT5G26670 56.757 3.63e-23 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0533 K19882 - gsj:114382010 287.73