Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0523 ATGGGGATTCAGACAATGGGATCTCAAGGTAATGGGCAACAGTCTCATTTACAGCCTTCATCTTTGTCCAGGCAAGGTTCATGGTATAGTCTCACTCTTGATGAGGTCAATTGTCAATTAGGAGACATGGGGAAGCCATTGGGTAGCATGAACCTTGATGAGCTTCTTCAAAATGTGTGGACTGCTGAAGCAAGCAAGTCTTTGGTGATAGGCGCGGAGAGTGAGAACATGTCGTCGTCTTCCTCGCTTCAACGGCAGGCCAGCCTGACGCTGGCTCGCGCATTGAGTGGGAAGACGGTGGATGATGTGTGGAGGGAAATTCAGCAAGGTCAGAAGAAAAGGTATGGAGAGGATGTGAAAAGTCAGGAGGGAGAAATGACTCTTGGTGAGACCACCTTAGAGGATTTCTTGGTGCAAGCAGGGCTTTTTGCTGAGGCTTCTATCAGTCCAGCTGTGGGGTTGGATACAATGGATTCCTCCGCTGCACAAGGTTTCCAACAGAAAACAGGCCTGTTGTCCTCCCCTTCAATTGGCAGTTTATCGGACACAAGACCGGGCCGGAAAAGGGATGCTCCCGATGCGTATGAGAAAACATTAGAAAGGAGGCTGAGGAGAAAAATCAAGAATAGGGAATCTGCTGCTCGATCTCGAGCCCGAAAACAGGCTTACCACAATGAACTGGTTAGCAAGGTTTCCCGTCTAGAAGAAGAAAATGTAAAGCTCAAGAAAGAGAAGCTATGCTGCTACGTTCACAAGGCTATCTTTGTATACATGTCACTGCTCAAAATCACGTTCAATAACAAAGAAGTACAAAGGCTGAAGATAGTAGCTGATTGA 837 0.4719 MGIQTMGSQGNGQQSHLQPSSLSRQGSWYSLTLDEVNCQLGDMGKPLGSMNLDELLQNVWTAEASKSLVIGAESENMSSSSSLQRQASLTLARALSGKTVDDVWREIQQGQKKRYGEDVKSQEGEMTLGETTLEDFLVQAGLFAEASISPAVGLDTMDSSAAQGFQQKTGLLSSPSIGSLSDTRPGRKRDAPDAYEKTLERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENVKLKKEKLCCYVHKAIFVYMSLLKITFNNKEVQRLKIVAD* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0523 278 CDD bZIP_plant_BZIP46 201 247 - -
Gso13g0523 278 Coils Coil 224 244 - -
Gso13g0523 278 Gene3D - 199 248 - -
Gso13g0523 278 MobiDBLite consensus disorder prediction 172 193 - -
Gso13g0523 278 Pfam bZIP transcription factor 201 244 IPR004827 GO:0003700|GO:0006355
Gso13g0523 278 MobiDBLite consensus disorder prediction 1 21 - -
Gso13g0523 278 SMART brlzneu 197 263 IPR004827 GO:0003700|GO:0006355
Gso13g0523 278 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 199 244 IPR004827 GO:0003700|GO:0006355
Gso13g0523 278 SUPERFAMILY Leucine zipper domain 201 245 IPR046347 GO:0003700|GO:0006355
Gso13g0523 278 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 204 219 IPR004827 GO:0003700|GO:0006355
Gso13g0523 278 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 35 247 IPR043452 GO:0003700|GO:0045893
Gso13g0523 278 PANTHER BZIP TRANSCRIPTION FACTOR 35 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0523 Gso-Chr13 17698528 17705560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0523 6 246 bZIP Transcription Factor Family AT2G41070 48.249 1.29e-55 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso13g0523 bZIP_1 5.9e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0523 K14432 - gmx:100798549 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0364 20 9655150 9666274 Gso13g0523 13 17698528 17705560 GST