Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0501 ATGATCTTGAGACACCCTTTGCTTACCCATTCTCGTTTAAGCTTATTCTCAATCACATCAGGAAGTAAGATAAGCTTAGTTCCCACATCTGAGATGATAAATTGTACAAGCCAACTGCTTTCTAAACCCCAAGATGAAGTTAACAGAAAAATCTTGAAGTTGCCAACATTAATTTTGGATCAAAAGGATAAAATGTTTTCAATGTTCCACTCTAATAATGGGTTGGTTGAAGATCCATGGGTTGTTGAGAGAGAAAAAGCTATGATCAACCCTTGGACGTCAGAGGAGAGAAAGATTTTCTCGGAGAAATTTGAAGCCTTTGGAAAAGATTTTCGAAAAATTGCTTCTTTCCTTGATCACAAGACAATTGCTGACTGTGTTGAATTCTACTACAAAGATCATAAGCCCAATTGTTTAGAGAAAGATAAGAAGAAGAAGAAGAAGAATAAGAAGAAGAAAAAGGGTTGTAAGAATCAAAAGTCAAAAACAGTCAAAACTGTCGTGAAGGTATTGGGTAAAAAAGGGAACCATAAAGCAAATGTTGATTCACAGAAGAAATCAATGATGGTGTGCGGCACTGTAGCTAATCAAAGAACACGTTCAGGAAGACTCCTCCTCTGGAGGAAATCCAATGAAAGCGAGAGGCTTGCAGCTGATGCATTGGTTGGTATGTGTGATTCTCTTTCACTTGAGGCTACAAGGCCACCATGCCAACAACCTGTGATACCTAACATTACTCATCAGGATATTGATGATGGAACTTGTGAGTGGACAGATGAGGAGAAGGCAACATTTCTTCAAGCTGTATCATCTTTCGGTGAGGATTTTAGGATGATTGCACAACATGTAGGAACAAAGTCCAAAGATCAGTGCAAGAGATTTTTCATCAAGGGTCAGAAATCCCATAGGTTGGATCTCATGCGCCACAGACTTGAAAATATTAGATCTCTACTTAATGAAATAAATCTTGGCAGGAGTGCTAACACTAATGATGCACGTGTTGTGGAGGCCATTGGCAATGATAAGTTAGACACAGAAACAAATGATCACCAGCCTTCGTCTGCTGCGAACTTGAGCCATGATAAATCCAAACATATGGAAGCTTGGAATCAGTTGATCGACTTAAATGAATCAAAGGAAATTAATAAAGAATTTGATCATGAAGATAAAAACATTGTTTCTAGCACATATAACGGTGAGTCTAAACTGGTGGACACTGATGGTTATGGGGTTGTCTTGTACAATTCTAATAAGTCGAGTTCAGTCAAGGACAAGAGAGCTAAAACTATGCCAGATATCATGGAAGTTGGAAAAGATAAAGGGGGAGATGCAGTTACAGAATTGGTGTCGTCTGCTTCTGAGATAATTGAACCATGTCACTCTCATTCTGTTGCTGAGGATAGACTAGTTTCTGTGATGTTGACATCATTTCCTACACGGCTCGATGATAAAGATGGTAAACATGGAGCTGATATGGATGATGATGTGGTTGAATTGAAAAGCCAAAGTCATGATTCAAACACCAAAGCAAATACTTGCTTATCATCTGTGGTAGTTTCTTACTCAGCATTGACTTTTGGTGCTGAAAATCAGTCCAAACTATTCCTGAAAAGGTCCAATTATTCAGGACTATCCATAGAGGATCCTCTCCCAACTGCAAATTCAATGTTACAAAATACCGTTCGTGCTGCGCATGCTGTTCAACAAGAGAAATCAGGTACCCGAGATGGACTGTCTTTTAAGGAGCCTGTTAAAAAACAAGTGAATGTGGATATGAGCTGCGTTGGTATAGTAACTGAACCAACTCTTTTGTCGCAGAAGTTTCCACAAATTGATGACCATCACAACACACAGTTGCCGTGTTTGTCAGGTTCAGAAAAAACGCCTGCAAATCATATTGTTTTGAAACTGTTTGGGAAGACAATGACCATTCCTTCATCCACTCAGAGGCCTGATTCAAGTGAAGATTCAAAGCATTTTATTGGGGAAAAAGAGAAAAAGAAAGAAGAGAAGTAG 2016 0.3894 MILRHPLLTHSRLSLFSITSGSKISLVPTSEMINCTSQLLSKPQDEVNRKILKLPTLILDQKDKMFSMFHSNNGLVEDPWVVEREKAMINPWTSEERKIFSEKFEAFGKDFRKIASFLDHKTIADCVEFYYKDHKPNCLEKDKKKKKKNKKKKKGCKNQKSKTVKTVVKVLGKKGNHKANVDSQKKSMMVCGTVANQRTRSGRLLLWRKSNESERLAADALVGMCDSLSLEATRPPCQQPVIPNITHQDIDDGTCEWTDEEKATFLQAVSSFGEDFRMIAQHVGTKSKDQCKRFFIKGQKSHRLDLMRHRLENIRSLLNEINLGRSANTNDARVVEAIGNDKLDTETNDHQPSSAANLSHDKSKHMEAWNQLIDLNESKEINKEFDHEDKNIVSSTYNGESKLVDTDGYGVVLYNSNKSSSVKDKRAKTMPDIMEVGKDKGGDAVTELVSSASEIIEPCHSHSVAEDRLVSVMLTSFPTRLDDKDGKHGADMDDDVVELKSQSHDSNTKANTCLSSVVVSYSALTFGAENQSKLFLKRSNYSGLSIEDPLPTANSMLQNTVRAAHAVQQEKSGTRDGLSFKEPVKKQVNVDMSCVGIVTEPTLLSQKFPQIDDHHNTQLPCLSGSEKTPANHIVLKLFGKTMTIPSSTQRPDSSEDSKHFIGEKEKKKEEK* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0501 671 MobiDBLite consensus disorder prediction 652 671 - -
Gso13g0501 671 MobiDBLite consensus disorder prediction 141 160 - -
Gso13g0501 671 MobiDBLite consensus disorder prediction 342 361 - -
Gso13g0501 671 SUPERFAMILY Homeodomain-like 76 135 IPR009057 -
Gso13g0501 671 SUPERFAMILY Homeodomain-like 256 303 IPR009057 -
Gso13g0501 671 SMART sant 88 136 IPR001005 -
Gso13g0501 671 SMART sant 253 301 IPR001005 -
Gso13g0501 671 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 10 670 - -
Gso13g0501 671 CDD SANT 256 297 IPR001005 -
Gso13g0501 671 Gene3D - 68 139 - -
Gso13g0501 671 Pfam Myb-like DNA-binding domain 256 296 IPR001005 -
Gso13g0501 671 MobiDBLite consensus disorder prediction 644 671 - -
Gso13g0501 671 Gene3D - 225 313 - -
Gso13g0501 671 ProSiteProfiles SANT domain profile. 87 132 IPR017884 -
Gso13g0501 671 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 10 670 - -
Gso13g0501 671 ProSiteProfiles SANT domain profile. 252 303 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0501 Gso-Chr13 17169326 17173761 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gso13g0501 Myb_DNA-binding 2.6e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0501 - - gsj:114382129 1271.91