Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0491 ATGCATAATAAGAAAGAGTTGATTTTGCGTGTAAAACAAAAAACCAAGGTCCCATCCTCCGCCACCGTCGCGTCCTCCACTCCCGATTCAACCCTAACCCTCAATTCCCTTCCCAATCAACCCTTCGTCATAGGAGTTTTTGGAGGTACTGCCTCGAGCAAAACCACCGTCTGCGATATGATCATTCAACAACTCCATGATCACCGCGTTGTCCTCGTAAATCAGGACTCGTTTTATCACGGGTTGAATCCTGAAGAGTTAGAACGTGTTCACGAGTACAATTTCGACCACCCAGATGCTTTTGACACGGAGCAGTTGTTAGAGTGCACAAGGAAGCTCATCAGTGGCCAGGGCGTGCATGTTCCCATTTATGACTTCAAGAAGCACCAATGCTCTTTCTGA 402 0.4726 MHNKKELILRVKQKTKVPSSATVASSTPDSTLTLNSLPNQPFVIGVFGGTASSKTTVCDMIIQQLHDHRVVLVNQDSFYHGLNPEELERVHEYNFDHPDAFDTEQLLECTRKLISGQGVHVPIYDFKKHQCSF* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0491 133 Gene3D - 3 132 IPR027417 -
Gso13g0491 133 PRINTS Uridine kinase signature 41 58 - -
Gso13g0491 133 PRINTS Uridine kinase signature 71 82 - -
Gso13g0491 133 PRINTS Uridine kinase signature 116 131 - -
Gso13g0491 133 PANTHER URIDINE KINASE 13 131 - -
Gso13g0491 133 Pfam Phosphoribulokinase / Uridine kinase family 43 130 IPR006083 GO:0005524|GO:0016301
Gso13g0491 133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 130 IPR027417 -
Gso13g0491 133 PANTHER URIDINE KINASE-LIKE PROTEIN 1, CHLOROPLASTIC 13 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0491 Gso-Chr13 17020093 17021751 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0491 38 130 PRT Gene Family AT5G40870 80.645 2.44e-48 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0491 K00876 - gmx:100780005 227.254