Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0479 ATGGACCTTCTCCTAAATTGCCTAAACCTTAACACCATTGCTATTGCATCAATCCTTTCTCTAATCTTCTTATGTTTGTTTCTATATCGTAAAAATTCTCGTGGGAAAGATGCTCCAGTAGTGTCTGGTGCATGGCCAATACTTGGTCACCTCTCATTGCTGAATGGTTCACAAACACCACATAAAGTGTTGGGTGCTTTGGCTGACAAGTATGGACCCTTATTCACCATCAAGCTCGGTATGAAACCGGCTTTGGTACTCAGCAACTGGGAAATGTCTAAGGAATTGTTCACCACAAACGACCTTGCCGTTTCATCTCGCCCTAAACTCGTCGCCGTTGAAGTCATGTCTTACAACCAAGCCTTTGTTGGCTTGGCACCGTATGGACCCTATTGGCGCGAGTTACGTAAAATTGTCACGTTCGAGTTTCTCTCCAATCGAAGAATCGAACAACGGAACCACATTCGTGTCTCCGAAGTTCGAACTTCGATTAAAGAGCTATTCGACATTTGGTCGAATGGAAATAAGAACGAGTCTAGGTATACTCTGGTGGACATAAAACAATGGTTGGCGTATTTGACATTTAACATGGTTGTGCGAATGGTCGTTGGGAAGAGGTATTTTGGTGTCATGCACGTGGAAGGCAAAGACAAAGCGCAAAGGTTTATGAAGAATATTAGGGAGTTCATGAATTTGATGGGGACTTTCACGGTGGCAGATGGGGTTCCTTGTTTGAGGTGGTTGGATTTGGGGGGTCATGAGAAGGCTATGAAGGCAAACGCTAAGGAAGTTGATAAATTATTGAGTGAGTGGTTGGAGGAGCACCGTCAGAAGAAGCTTTTAGGTGAAAATGTTGAAAGTGATAGAGACTTCATGGACGTGATGATTTCAGCACTTAATGGTGCACAAATCGGTGCGTTTGATGCTGATACCATATGCAAAGCCACAAGCTTGGAATTGATTTTGGGAGGAACTGATTCAACAGCTGTTACTCTTACATGGGCACTTAGTCTTCTATTGCGAAATCCTCTTGCATTGGGAAAGGCTAAAGAAGAAATTGATATGCAAATTGGCAAAGATGAATATATACGTGAGTCAGATATAAGCAAACTTGTGTATCTTCAAGCTATAGTTAAAGAGACACTAAGATTGTATCCACCAGCCCCTTTTTCATCACCTCGTGAATTCACAGAGAATTGCATCCTAGGTGGATACCACATCAAAAAGGGAACTCGACTTATCCATAACTTGTGGAAGATCCACAGGGACCCTAGTGTTTGGTCAGACCCATTGGAATTCAAACCAGAAAGGTTCCTTACCACTCACAAAGATGTTGATCTAAGGGGTCACAATTTTGAGTTGTTACCCTTTGGAAGCGGGAGAAGAGTTTGTGCTGGAATGTCCCTTGGCTTAAACATGGTTCATTTCACTTTGGCTAATTTATTGCATTCCTTTGACATCTTGAATCCATCGGCTGAACCTGTAGACATGACTGAATTCTTTGGATTTACCAACACCAAGGCTACTCCACTTGAGATTTTGGTCAAACCACGTCAGTCTCCCAACTATTATGAAACTTTATAA 1584 0.4236 MDLLLNCLNLNTIAIASILSLIFLCLFLYRKNSRGKDAPVVSGAWPILGHLSLLNGSQTPHKVLGALADKYGPLFTIKLGMKPALVLSNWEMSKELFTTNDLAVSSRPKLVAVEVMSYNQAFVGLAPYGPYWRELRKIVTFEFLSNRRIEQRNHIRVSEVRTSIKELFDIWSNGNKNESRYTLVDIKQWLAYLTFNMVVRMVVGKRYFGVMHVEGKDKAQRFMKNIREFMNLMGTFTVADGVPCLRWLDLGGHEKAMKANAKEVDKLLSEWLEEHRQKKLLGENVESDRDFMDVMISALNGAQIGAFDADTICKATSLELILGGTDSTAVTLTWALSLLLRNPLALGKAKEEIDMQIGKDEYIRESDISKLVYLQAIVKETLRLYPPAPFSSPREFTENCILGGYHIKKGTRLIHNLWKIHRDPSVWSDPLEFKPERFLTTHKDVDLRGHNFELLPFGSGRRVCAGMSLGLNMVHFTLANLLHSFDILNPSAEPVDMTEFFGFTNTKATPLEILVKPRQSPNYYETL* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0479 527 Gene3D Cytochrome P450 27 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0479 527 Pfam Cytochrome P450 44 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0479 527 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0479 527 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0479 527 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0479 527 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0479 527 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0479 527 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0479 527 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0479 527 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0479 527 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0479 527 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0479 527 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0479 527 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0479 527 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0479 527 PANTHER CYTOCHROME P450 82C3-RELATED 1 526 - -
Gso13g0479 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Gso13g0479 527 PANTHER CYTOCHROME P450 82A3 1 526 - -
Gso13g0479 527 SUPERFAMILY Cytochrome P450 44 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0479 Gso-Chr13 16861397 16864040 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0479 18 518 Cytochrome P450 AT4G31940 49.312 1.33e-177 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0479 - - gmx:100789386 1043.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0479 13 16861397 16864040 Gso19g0133 19 1498775 1501253 GST