Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0452 ATGGGGATATCGCAAGCCATGGACGCTCTTCGACAAAGAGCAGTGTTTGTGAAAGAGTCACTTCACAAGAGTCAGACCATCACTGATAACATGGTTTCCATTCTCGGTTCCTTTGATCATCGCCTCTCCGCACTCGAAACTGCCATGCGTCCCACTCAGATAAAAACACATTCAATTCGTAGCGCACATGATAATATTGACAAGACTCTAAAAGCAGCAGAGGGGATTTTGTCTCAATTCGATCAAACACGAATGGCCGAGGCTAAAATACTACGAGGGCCACATGAAGATCTAGAAAGCTATTTAGAAGCAATTGATCAGTTGAGAGCAAATGTTCGTTTCTTTAGTAGTAACAAAAGTTTCAAAAGTAGCGAAGGAATCATCAACCATGCGAACAACTTGCTTGCCAAAGCTATGACAAAGCTTGAAGAGGAATTCAAACATCTTTTAACAAATTACAGTAAACCTGTAGAACCTGATCGCCTTTTTGAGTGCCTACCAAACTCTCTAAGGCCATCAAATTCTGGGAAGCAAAGTGAAGGCGGTGGTAAAAACCATTCTGAAAAACAAAGTTCAGAAACAGTCACTTTCGCACTTCCAATTCTCATTCCACCAAGAGTTATACCTTTGCTACATGATTTAGCACAACAAATGGTTCAAGCTGGTCATCAACAACAACTCTTTCGAATTTATAGAGACACTCGTGCTACAGTTCTGGAACAAAGTCTTAGAAAATTAGGTGTGGAGAGGCTGAGTAAAGATGATGTTCAAAAAATGCAATGGGAGGTTTTGGAGGCAAAGATTGGAAATTGGATTCATTACATGAGAATTGCTGTCAAATTGTTGATTTCCGGAGAGAAGAAAATTTGTGATCAAATATTTGATAGTGTGGACTCTTTGAAAGCTCAATGTTTTGCTGAAGTCACTGCTAGTAGTGTGGCTATGCTTCTTAGTTTTGGAGAGGCTATTGCGAAAAGCAAGAGGTCACCTGAGAAATTATTTGTTCTTTTAGACATGTATGAGATAATGAGAGAACTTCAACCAGAGATTGAGAGACTTTTTGAAAGTAAAGCATGCATTGAAATGCGGGACGCCGCAATGAATTTGACAAAAAGATTAGCTCAAACAGCCCAAGAAACCTTTATTGACTTTGAGGAAGCAGTTGAAAAAGATGCCACTAAAACTACTGTTATGGATGGAACTGTTCACCCACTAACAAGCTATGTGATCAATTACGTGAAGTTTCTTTATGATTATCAATCAACTTTGAAACAACTTTTTCATGAGTTTGATCCCAATGATCCAGAAGGACAATTAGCAATTGTTACAACAAGGATTATGCAGGCTCTCCAAAGTAACTTGGATGGAAAATCAAAACAATATAAAGATCCAGCATTGACGCAATTGTTTCTTATGAACAATATCCATTACATAGTGAGATCTGTGAGAAGGTCAGAGGCAAAGGATATGTTAGGGGATGATTGGGTGCAAATACATAGAAGAATTGTTCAGCAACATGCAAATCAATATAAAAGGATCTCTTGGGCAAAGATTTTGCAATGTCTCACTATCCCAGGAGGGGATAATAATGGTGGAGTCTCAAGAACAATGGTTAAAGATAGATTCAAAACCTTTAACGATCAAATTGAGGAGATTCATCAAAGACAATCTCAATGGACTGTCCCAGATAGTGAATTACGTGAATCTCTTAGATTGGCTGTTGCTGAAGTCTTGTTACCTGCGTATAGATCTTTCCTTAAACGATTTGGGCCCATGATTGAAAACGGCAAAAATCCTCATAAGTATATCGTATACTCTCCCGAACATCTTGAGCAAATGTTGGGTGAGTTTTTTGAAAGCAAGATTTGGGGTGAACAAAAGCGATAA 1887 0.3863 MGISQAMDALRQRAVFVKESLHKSQTITDNMVSILGSFDHRLSALETAMRPTQIKTHSIRSAHDNIDKTLKAAEGILSQFDQTRMAEAKILRGPHEDLESYLEAIDQLRANVRFFSSNKSFKSSEGIINHANNLLAKAMTKLEEEFKHLLTNYSKPVEPDRLFECLPNSLRPSNSGKQSEGGGKNHSEKQSSETVTFALPILIPPRVIPLLHDLAQQMVQAGHQQQLFRIYRDTRATVLEQSLRKLGVERLSKDDVQKMQWEVLEAKIGNWIHYMRIAVKLLISGEKKICDQIFDSVDSLKAQCFAEVTASSVAMLLSFGEAIAKSKRSPEKLFVLLDMYEIMRELQPEIERLFESKACIEMRDAAMNLTKRLAQTAQETFIDFEEAVEKDATKTTVMDGTVHPLTSYVINYVKFLYDYQSTLKQLFHEFDPNDPEGQLAIVTTRIMQALQSNLDGKSKQYKDPALTQLFLMNNIHYIVRSVRRSEAKDMLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTIPGGDNNGGVSRTMVKDRFKTFNDQIEEIHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFLKRFGPMIENGKNPHKYIVYSPEHLEQMLGEFFESKIWGEQKR* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0452 628 Gene3D Exocyst complex component Exo70 75 628 - -
Gso13g0452 628 MobiDBLite consensus disorder prediction 166 191 - -
Gso13g0452 628 Pfam Exo70 exocyst complex subunit 270 615 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gso13g0452 628 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 36 623 - -
Gso13g0452 628 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 623 IPR004140 GO:0000145|GO:0006887
Gso13g0452 628 SUPERFAMILY Cullin repeat-like 76 619 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0452 Gso-Chr13 16545615 16565697 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0452 1 628 EXO70 exocyst subunit family AT5G52340 78.041 0.0 1025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0452 K07195 - gmx:100779774 1220.68