Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0440 ATGGAGAGCATGGACAGATCTAAGGGAGGGAGAAACATCGATGTTATTCAAGGAAGAAATGTTACAAATGATATGGTTAGACACCAATCAGATACTCAAAGAACCTCATCCACCAAAAGGTCAAAAGGATCCTTATCCACCAACTTAAACCAAAAAATAATTGAAGCTTCTTCCCTTCGAAGATTTACCTTTAATGATCTGAAGTTGGCAACCAGAAATTTTGAGTCTAAGAATGTTCTTGGTGAGGGAGGGTTTGGAACTGTGTTGAAAGGTTGGGTCAATGAGCATGGAAACTTTGTAGCACGACCTAGAATGGGAATTCCAGTAATAGTGAAGACTCTTAACCCAAATGGATTTCAGGGTCACAAGGAATGGCTTACTGAAATAAATTATCTTAGTGAGCTCCATCATCCAAATCTGGTTAGATTGATTGGCTATTGCATCAAGGATGACAAAAGGTTGCTAGTATATGAGTATATGTGTCGAGCAAGCTTAGACAAACATTTGTTCAAGAGAACTAAGCACCTTACATGGCCTATCAGAATTAAGATTGCAATTGGTGCTGCTAATGCCCTTGCATTTTTGCATGAGGAAGTTTCAAGGCCGGTAATATTTCGAGATTTCAAGACATCTAATGTCCTATTGGATAAGGACTACAATGCAAAACTTTCTGACTTTGGGCTTGCGCAAGATGCTCCAGTGGGAGATAAAAGTCACGTTTCCACTGAAGTAATGGGAACACAAGGTTATGCAGCCCCTGAGTATGTGATGACAGGTTAG 780 0.3987 MESMDRSKGGRNIDVIQGRNVTNDMVRHQSDTQRTSSTKRSKGSLSTNLNQKIIEASSLRRFTFNDLKLATRNFESKNVLGEGGFGTVLKGWVNEHGNFVARPRMGIPVIVKTLNPNGFQGHKEWLTEINYLSELHHPNLVRLIGYCIKDDKRLLVYEYMCRASLDKHLFKRTKHLTWPIRIKIAIGAANALAFLHEEVSRPVIFRDFKTSNVLLDKDYNAKLSDFGLAQDAPVGDKSHVSTEVMGTQGYAAPEYVMTG* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0440 259 ProSitePatterns Protein kinases ATP-binding region signature. 80 112 IPR017441 GO:0005524
Gso13g0440 259 Gene3D Phosphorylase Kinase; domain 1 45 159 - -
Gso13g0440 259 Pfam Protein tyrosine and serine/threonine kinase 76 257 IPR001245 GO:0004672|GO:0006468
Gso13g0440 259 MobiDBLite consensus disorder prediction 16 46 - -
Gso13g0440 259 Gene3D Transferase(Phosphotransferase) domain 1 160 259 - -
Gso13g0440 259 MobiDBLite consensus disorder prediction 1 46 - -
Gso13g0440 259 PANTHER TYROSINE KINASE FAMILY PROTEIN 25 259 - -
Gso13g0440 259 SUPERFAMILY Protein kinase-like (PK-like) 59 258 IPR011009 -
Gso13g0440 259 PANTHER OS01G0588500 PROTEIN-RELATED 25 259 - -
Gso13g0440 259 ProSiteProfiles Protein kinase domain profile. 74 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0440 Gso-Chr13 16341355 16344647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0440 50 259 Glycoside Hydrolase AT3G07070 50.704 4.85e-68 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gso13g0440 PK_Tyr_Ser-Thr 3.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0440 - - gmx:100776584 518.079