Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0402 ATGGAGAATTGGAGGGGTGCTCGGTTGATGGTGGTGGCGAGTGTGGTGGCAATAGGGTGGCTTTCGTTGGTGGTCATGGGAAGTCCGGTGCTTCACAAGGTGGGAGGGTCCAAAGGTTGGATCAATCACGATGTGAACTACACTGAATGGGCTGCTCAAGAGCATGTCTATGTTGGGGATTGGCTCATCTTCAAGTTCGACAGACGATACTTCAACGTTCTGGAGGTGAACAAGACAAGCTACGAGAACTGCATAGACAGGGACTTCATAAAAAACATCACTCGAGGTGGTCGTGACGTGGTGCAAATGACGGAGGCAAGGACCTACTACTACCTCTCCGATGGAGGTTACTGTTTTCATGGTATGAAAGTGGCTGTGCAAGTTCAAGAGTACCAAGATCCCGCACTCGCAATGGTGGCACCAGCTCCTTCCCCCGTCGTGTCTGGTTCTTCTGTGTTCACATGCATTTGGATCATTGTTGCTAATGTTGTGCTTTTTGTGAATTTGATGGTAGTGGGCATTTTGTAA 528 0.4905 MENWRGARLMVVASVVAIGWLSLVVMGSPVLHKVGGSKGWINHDVNYTEWAAQEHVYVGDWLIFKFDRRYFNVLEVNKTSYENCIDRDFIKNITRGGRDVVQMTEARTYYYLSDGGYCFHGMKVAVQVQEYQDPALAMVAPAPSPVVSGSSVFTCIWIIVANVVLFVNLMVVGIL* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0402 175 ProSiteProfiles Phytocyanin domain profile. 30 130 IPR003245 GO:0009055
Gso13g0402 175 PANTHER BLUE COPPER PROTEIN 9 166 IPR039391 GO:0009055
Gso13g0402 175 PANTHER EARLY NODULIN-LIKE PROTEIN 20 9 166 - -
Gso13g0402 175 Gene3D - 30 133 IPR008972 -
Gso13g0402 175 Pfam Plastocyanin-like domain 42 122 IPR003245 GO:0009055
Gso13g0402 175 SUPERFAMILY Cupredoxins 31 129 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0402 Gso-Chr13 15683700 15686376 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0402 16 166 Phytocyanin Superfamily AT2G27035 40.789 1.74e-38 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0402 - - gmx:100788336 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0402 13 15683700 15686376 Gso19g0234 19 3345936 3348521 GST