Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0401 ATGGAGAGGATGAAGAGGGTGCTTCTGCTGCTTCTGGCCTTCACTGTTCTTCTCATGTTGCCAGAAGCTTCTGCTACAAAGTTTACTGTTGGAAACAACCAGTTTTGGAACCCCAATATTAACTACACTGAGTGGGCTAAAGGCAAACATTTCTACCTTGGTGACTGGCTCTATTTTGTGTACGATAGGAACCAAGCGAGCGTGTTGGAAGTGAACAAGACAGATTATGAAACATGTAACTCTGATCATCCACTCACAAATTGGACTAGGGGAGCTGGAAGAGACGTGGTTCCATTGAATGTAACAAAAACTTACTACATTATCAGTGGCCGAGGGTTCTGCTTCAGCGGCATGAAGATAGCAGTTCATGTTGAAAAGCTGCCACCTCCACCAAAAGCTGCCCCTGTAAAGTCCGCGGCACCGACCCTTTTTTCACAAGACCGCATTCTTCTCATGCCTGTTGTTTTTGCCATTGGAGCAGCATGGGATGCATTCATTCATTTCTGGTAG 510 0.4569 MERMKRVLLLLLAFTVLLMLPEASATKFTVGNNQFWNPNINYTEWAKGKHFYLGDWLYFVYDRNQASVLEVNKTDYETCNSDHPLTNWTRGAGRDVVPLNVTKTYYIISGRGFCFSGMKIAVHVEKLPPPPKAAPVKSAAPTLFSQDRILLMPVVFAIGAAWDAFIHFW* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0401 169 SUPERFAMILY Cupredoxins 25 124 IPR008972 -
Gso13g0401 169 PANTHER BLUE COPPER PROTEIN 5 161 IPR039391 GO:0009055
Gso13g0401 169 Gene3D - 24 127 IPR008972 -
Gso13g0401 169 ProSiteProfiles Phytocyanin domain profile. 26 126 IPR003245 GO:0009055
Gso13g0401 169 PANTHER LAMIN-LIKE PROTEIN 5 161 - -
Gso13g0401 169 Pfam Plastocyanin-like domain 36 118 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0401 Gso-Chr13 15672770 15675046 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0401 7 169 Phytocyanin Superfamily AT5G15350 57.576 5.63e-70 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0401 - - gmx:100305564 337.035