Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0374 ATGGCAGAGACACCAACCCTCAGAATCCACGAAGTCTGCCCCATCTCGCCGCCACAAGAAACCCCATCAACCACTATTCCCTTCACCTTCTTCGACGTCCTATGGCTACGCCTCCCCCCAGTGGAGCGTCTGTTCTTCTATTCCTTCCCAAACCCAACAACAACCTCTTCATTCTTCGACACCACCATTCTCCCAAATCTCAAACACTCCCTCTCCCTCACTCTCCACCACTTCCCTCCTCTCGCCGGCACCATCACATGGCCACTTCACACACCCCTCCCCCTCATCACCTACACCCCCGGAAACTCAATCCCCTTCAGAATCGCCGAATCCAACGCAGACTTCAACACCCTCTCTTCAAACCTCTCAGAAGTTAACAACCACCGCCGAAACCTAATACCCCACTTACCCACTTCCCACGAAGAAGCTTCGGTGTTAGCCCTTCAACTCACCCACTTCCCAAACCAAGGCTATTCGATAGGAATAACAAGCCACCACGCAGCACTTGATGGAAAGTCTTCAACTTTGTTCATGAAATCGTGGGCGCATATTTGTTCTTACCTCAATACCTCACCGGAAGAACCGTTGCTGTTTTCACTACCGAAGCATCTAACACCTTCGTTTGATAGATCTGTCATAAGAGACCCTTTGGGGATCGGTGAGATTTACGCGAAGTCGTGGACGAGCTTCGGTGGAGCCACCAATGACCGAAGCTTGAACGTGTGGGATACCCTCGGTGGAAATCAAACCGATTTGGTTAAAGGATTGTTTGAGTTGACACCGTTGGATATCAAGAAGCTGAAGAAGTTAGCGGAGTCCAAGTTTGTTGTCGGAGACAACAAGAAGAAAGTTAGGGTGACATCATTTACGGTCACGTGCGCTTACCTGTTGTCATGCGCGGTGAAAGCGGAGCAACCCAACTGCGAAAGAGTGCCTTTTGTCTTCAACGTGGACTGTAGGGCGCGTTTGGACCCCCCAATTCCGGAAACGTACTTCGGGAACTGCGTCGTGGCTTTGTTGGCTTCGGCCAAGCGAGAAGAGCTTTTGGGGGAAGAAGCGTTTTTCAAAAGCGTTATAGGGATAAGCGAGGAGTTGAACGGGTTAGAGGGTGACGTGTTGAACGGCGCGGACAAATGGATTCCGAAGATTCAATCGGTGGTATCGGAGACTCCTAGGTTGTTCTCCGTCGCCGGGTCCCCGAGGTTTGAGGTTTACGGCATTGACTTTGGGTGGGGAAGGCCTGAGAAAGTGGATGTCACATCCGTTGATAAAACGGGTGCGTTTTCGCTCTCGGAGAGTAGGGATCATAGTGGAGGGATTCAAATTGGGTTGGCGTTGACCAAGAATCAAATGGAGGCGTTTTCTAGGGTTTTTGCTCAAGGACTTGAGTCCTTGGAATCATGA 1404 0.5078 MAETPTLRIHEVCPISPPQETPSTTIPFTFFDVLWLRLPPVERLFFYSFPNPTTTSSFFDTTILPNLKHSLSLTLHHFPPLAGTITWPLHTPLPLITYTPGNSIPFRIAESNADFNTLSSNLSEVNNHRRNLIPHLPTSHEEASVLALQLTHFPNQGYSIGITSHHAALDGKSSTLFMKSWAHICSYLNTSPEEPLLFSLPKHLTPSFDRSVIRDPLGIGEIYAKSWTSFGGATNDRSLNVWDTLGGNQTDLVKGLFELTPLDIKKLKKLAESKFVVGDNKKKVRVTSFTVTCAYLLSCAVKAEQPNCERVPFVFNVDCRARLDPPIPETYFGNCVVALLASAKREELLGEEAFFKSVIGISEELNGLEGDVLNGADKWIPKIQSVVSETPRLFSVAGSPRFEVYGIDFGWGRPEKVDVTSVDKTGAFSLSESRDHSGGIQIGLALTKNQMEAFSRVFAQGLESLES* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0374 467 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 1 465 - -
Gso13g0374 467 Gene3D - 7 237 IPR023213 -
Gso13g0374 467 Gene3D - 249 465 IPR023213 -
Gso13g0374 467 Pfam Transferase family 15 456 - -
Gso13g0374 467 PANTHER - 1 465 - -
Gso13g0374 467 SUPERFAMILY CoA-dependent acyltransferases 283 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0374 Gso-Chr13 15359187 15361629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0374 7 456 Monolignol Biosynthesis Gene Families AT5G48930 23.769 1.18e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0374 - K13264 gmx:100127426 950.658