Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0373 ATGATCAACAGCACAAAAGAAGCTGATTTTCCACTAAAACAAGAAGGTCTTTCATCAGGTGATCATGAAAAGGCTAAGGCTCCATCGACCTCATCATCATCATCACAATGGCTAAAACTGAAGGATCCAAGGATTGTTCGTGTGTCTCGAGCCTTCGGAGGAAAAGACAGGCACAGCAAGGTGTGCACAATAAGAGGGCTAAGAGATAGAAGAGTGAGGCTTTCAGTCCCTACAGCAATTCACCTCTATGATCTCCAAGATAGGCTTGGACTCAACCAACCAAGCAAGGTTGTTGATTGGTTGCTCAATGCAGCAAAACATGAAATTGATGAACTTCCACCACTTCCTATTCCTCCAGGTAACTTCACCCTTGGTTATCCCTCTCTTGTTTCTTGTAATGAAGTTAGCACCTCTCGTGAAGGTTCAGGCCAGAACACTTTATTGTGGAAACCAAAATCAGGAGAAATGGTTAGTGATGATAAAGCAAATTGGATGAATAGAAGTGAAGGAGATGATGATAATAATCATAATAATAGTAATGGTAAAGAAGGAAGCAATAATAATATTTGTCATGGTGGTACACTTGTTTTGCCAAATAATCTCTTGCCAAGACCAAACCATCCTTCTTTTTTGAGCTTGATGAACATTATGCCATCACTTGGTTACCAATGGGAGCCTAATAATTCAGCTCATGATGTTAATATTGGTCAATGGCAAAACCATGGATTTCTTAACCAAACAGATGTACACAGCATCAATGTGGTTCCATTTCCATCAACATTGGCTCTATCAACTGGGAGTGATACTACTACTACTTCTCAGATTTTGGTGTGTCCTCCTCATGGAGCAACAACACAGCCATATTTCCCTTCTTCACATCATGTTGCAGCAATGGAGATGAATGCAAGACAAATCAACCACTATCAGATGCTGAGTTCAAGTTCTCATCAAAATCTCTTGGCAAATTCTCTCAATCCATCATCACAGCAACTCATGAGCCAATCAGAGAAATTGCCATTCAGCTTGGGAATTAGGCCTAAACTTTTCCATTCTCCTAACAGAAGTGAAAGCCATTCCCAAAAAGACCAGGATTTGCCTTCCAAGTGA 1107 0.4056 MINSTKEADFPLKQEGLSSGDHEKAKAPSTSSSSSQWLKLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIHLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLPIPPGNFTLGYPSLVSCNEVSTSREGSGQNTLLWKPKSGEMVSDDKANWMNRSEGDDDNNHNNSNGKEGSNNNICHGGTLVLPNNLLPRPNHPSFLSLMNIMPSLGYQWEPNNSAHDVNIGQWQNHGFLNQTDVHSINVVPFPSTLALSTGSDTTTTSQILVCPPHGATTQPYFPSSHHVAAMEMNARQINHYQMLSSSSHQNLLANSLNPSSQQLMSQSEKLPFSLGIRPKLFHSPNRSESHSQKDQDLPSK* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0373 368 ProSiteProfiles TCP domain profile. 54 112 IPR017887 -
Gso13g0373 368 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 1 364 - -
Gso13g0373 368 MobiDBLite consensus disorder prediction 163 188 - -
Gso13g0373 368 MobiDBLite consensus disorder prediction 351 368 - -
Gso13g0373 368 MobiDBLite consensus disorder prediction 1 38 - -
Gso13g0373 368 Pfam TCP family transcription factor 54 172 IPR017887 -
Gso13g0373 368 MobiDBLite consensus disorder prediction 24 38 - -
Gso13g0373 368 MobiDBLite consensus disorder prediction 342 368 - -
Gso13g0373 368 MobiDBLite consensus disorder prediction 163 178 - -
Gso13g0373 368 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 364 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0373 Gso-Chr13 15326764 15329444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0373 37 124 TCP Transcription Factor Family AT3G02150 84.091 7.25e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gso13g0373 TCP 2.6e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0373 - - gmx:100803100 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0373 13 15326764 15329444 Gso19g0269 19 3844118 3846983 GST