Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0371 ATGTCTAAAAAGGTTTTGACATCAATGAAGGATGAAAATCCAGATTTGCAGAAGCAAATTGGGTGCATCAGTGGGTTTTTTCAGCTGTTTGACCGCCACAGTTTCCTCACAGGTCAAAGCAATAGCAGCCACAATCAGAACATACCAAATAATAAAGGTGGAATCAGCAACCATATCAAAGAGGTGAAAAATACAACTCAAAAGGCAACGGCAAATAATGTGAAGGTTGCAAGAGAGAATCAACAATTCTCCACTGAATCATCAGGAACTTCAATGACTTCATCGTCTCGCTCATCTAGCATGTCGTCCCTCGAGTTTAATAGAACAATTCAGATAGAGCCACCACCAATCAATCAAATGAAAATTCCAGAAAACTCTAACTCAGGAGCAGCAATGAAGCAAGGCAGCCAAGGCCATCAACCTCTTGATTTCTATGATATTGTCAAAGAGTCAATGCATAGAGATGTTCATGGATTGTCAGTAAAAACTGTAGCTAAAGAGGAAAAGAAGGGTCGTATCTTGAAATACATTGACTCTCCCAGGCCTTTGGAGCCCTCCAAATTTGTCAATACAGGAGTTATGGTTGCTTGGGATTCACCAAGACTCTCTTATGATGGGAGGGACACACAAGATACATTCAAATCCGCTACAAAGCCAAAGGAACTCCCAAGGCTTTCCTTGGACAGCAGACAAGGATCTATCAAAAGTTTCAATGAAGGAACAAAATCTCGTAGCCTTTTGAAGGGTCCCCAGAAAGGGTATGGTAGCTCCAGTACAATGCAGCTGCAGGAACCAGAAACTTCTAGAAGACCATCCAGTGTTGTAGCAAAGTTAATGGGACTTGAAGCCTTCCCAGACTGCACAGAAACTTGTGATACTCCGCCGCGAATCTCTAGCTGCGCCACCAACAAAAATGAGACAACCGCAGGACCTAGCACAAATGATGAGTACAAGCAACACCAAAGTGCAGCATCATCCCAGAGAACAATCAAGGGGTCTACCTTGCTTCAGTTTAGGAGGGATGCTTCAATCATGAACATGACGCCATATTCACGGTTTTCCCTTGAACCAATTCCGTGGAGGCAACCTGAAGCAAGCCAAGGTTCTCAATTACAGGATTCTAAGAGAAGCGAATCTTCAGCAAAAGCATCAAAACTGCCCCTCTCTGTATATGGGGAAATTGAAAAGAGGATAGCAGATCTAGAGTTCAAAAATTCTGGAAAAGATCTCAGGGCCCTTAAACAGATTCTTGATGCAATGCAGAGATATAAAGAATCATTGGATATTCCAAGAGATCAGTTGTCTAATTCTCTATCTGACAATAGAAGTAATAGCAGTCTCAGTGAAAGCATAATAGTAAAAAGCCCAAGACTACGGCAGAAGGACCCAACATCCACCACTGTTGAGATGTCAAATTCAACCCAGGGTAGTAAGTCGCCGATTTTCATCATGAAACCAGCAAAAGCTGCAAGAAAAACCAATAGTCCAGCTTCCACAGAAATGTCATTTCAGGGTAAATCAGGCCCCAGCAAGTTTAGCCCTGCTAACCGCACAAATGGAATAATGGGTGACAAGCTTGACAGGCAAACAGCAAAGGGTATTGGTCCAGCAATCACACATGCCACAGATCCCATCAGCCAACCCTTTCACTCAGTGAATAAGAGTAATAAGAAGAGAACTTCAAAATTGATGCAATCCTCAAAAGTTCGTCAAGTAATCAATGGAGAAAATGCCACCAACTCCAGCAATACAGCAGAAGCCAAGAGCCCAAGACTACAAAAGAAGTTTGGTTTGGAGAGGCGTTCTCCGCCAACTAGCCCATCATCAGATTTGAGCAGTAACAGAAGACAACAGAATAGGCAATCAGTGGAATTGTCTTCCCCAAGTACAACACCCAGACAAAAATTCAGTGAGATTAGCAATCAAAGGAGGGATTTTAAGCATGAAGTTGACCTAGAAGTCATTCACATTGATCATTCTGATAGGATCAATGGCAACACCATCCAGCTAAAGGGCATTAACCAAAATAATGCTGCAGAAGAGTTGAGTAAGGAAAGCTTTATGGCTGAGAAAACAATTACAGCAGAACAGCCAAGCCCTGTGTCTGTTCTAGATGCTTCTTTCTACAGAGAAGAACCACCTTCTCCAGTTAAAAAGAAATCAGACATCTCAAAAGATTTAGATGATGCTCTGAACACTTATGATAGTAGTGAGGAGAACTCAGAAGATCTTCCACTTTCATCCAACACTACAAAAGCCAACTTCAGCAGTGATACTGACTTGAGAACTCAAAATTTGGTCGAAATTCTCCAACAAATTGACAACAGTGATGAGAGATTCACCAATTTCAGAGACAATAAAGATCCTGATCATAGATATATATCAGAAATACTGTTAGCATCGGGGCTGCTCAGCAGTCCAAGCTCTAGCCAGGTTTTTCATTCATCAAGTTACCCAATAAACCCAAAGTTGTTCCTTGCACTGGAGCAAATCAAGACAAACAAGATGTGTTTCAACATTGAACATAATGCCAAGAATATTGCTGGGCTGAATAGTCCTGAGCAAATGCAAAGAAAGCTAATATTTGATGTTGTTAATGACATTCTAGCTCAGAAAATAGTATTGGAAAGTTCTACTCTGTGGCGCCAACCAAATCAGCAAGCAGGTAGAAAACTAAGTGGACAGCTGCTTTTGGATGAGCTTTGCACAGAAATTGATAAGTTGCAACATAAAAATACAAATGTCAACCTGGCTGATGAGAATGAGAATTTGACAAGTCTCCTGTGGGAAGAGTTGATGCACTGTCCCACAATTTACACAAACAGTTACAGTGAAATACCAAATGTCGTGTTGGATATTGAACGGTTGATCTTCAAAGATTTGATAACTGAAGTTGTGAGAAGTGAACTAGCTAACCATTCTGGTAAGCATTGCAGACAACTGCTGCTTTCCAAGTAG 2958 0.4138 MSKKVLTSMKDENPDLQKQIGCISGFFQLFDRHSFLTGQSNSSHNQNIPNNKGGISNHIKEVKNTTQKATANNVKVARENQQFSTESSGTSMTSSSRSSSMSSLEFNRTIQIEPPPINQMKIPENSNSGAAMKQGSQGHQPLDFYDIVKESMHRDVHGLSVKTVAKEEKKGRILKYIDSPRPLEPSKFVNTGVMVAWDSPRLSYDGRDTQDTFKSATKPKELPRLSLDSRQGSIKSFNEGTKSRSLLKGPQKGYGSSSTMQLQEPETSRRPSSVVAKLMGLEAFPDCTETCDTPPRISSCATNKNETTAGPSTNDEYKQHQSAASSQRTIKGSTLLQFRRDASIMNMTPYSRFSLEPIPWRQPEASQGSQLQDSKRSESSAKASKLPLSVYGEIEKRIADLEFKNSGKDLRALKQILDAMQRYKESLDIPRDQLSNSLSDNRSNSSLSESIIVKSPRLRQKDPTSTTVEMSNSTQGSKSPIFIMKPAKAARKTNSPASTEMSFQGKSGPSKFSPANRTNGIMGDKLDRQTAKGIGPAITHATDPISQPFHSVNKSNKKRTSKLMQSSKVRQVINGENATNSSNTAEAKSPRLQKKFGLERRSPPTSPSSDLSSNRRQQNRQSVELSSPSTTPRQKFSEISNQRRDFKHEVDLEVIHIDHSDRINGNTIQLKGINQNNAAEELSKESFMAEKTITAEQPSPVSVLDASFYREEPPSPVKKKSDISKDLDDALNTYDSSEENSEDLPLSSNTTKANFSSDTDLRTQNLVEILQQIDNSDERFTNFRDNKDPDHRYISEILLASGLLSSPSSSQVFHSSSYPINPKLFLALEQIKTNKMCFNIEHNAKNIAGLNSPEQMQRKLIFDVVNDILAQKIVLESSTLWRQPNQQAGRKLSGQLLLDELCTEIDKLQHKNTNVNLADENENLTSLLWEELMHCPTIYTNSYSEIPNVVLDIERLIFKDLITEVVRSELANHSGKHCRQLLLSK* 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0371 985 MobiDBLite consensus disorder prediction 737 756 - -
Gso13g0371 985 MobiDBLite consensus disorder prediction 433 522 - -
Gso13g0371 985 MobiDBLite consensus disorder prediction 301 332 - -
Gso13g0371 985 MobiDBLite consensus disorder prediction 602 637 - -
Gso13g0371 985 MobiDBLite consensus disorder prediction 536 642 - -
Gso13g0371 985 MobiDBLite consensus disorder prediction 492 517 - -
Gso13g0371 985 MobiDBLite consensus disorder prediction 565 589 - -
Gso13g0371 985 MobiDBLite consensus disorder prediction 355 384 - -
Gso13g0371 985 PANTHER LONGIFOLIA PROTEIN 1 984 - -
Gso13g0371 985 MobiDBLite consensus disorder prediction 733 756 - -
Gso13g0371 985 PANTHER LONGIFOLIA PROTEIN 1 984 IPR033334 GO:0051513
Gso13g0371 985 Pfam Domain of unknown function (DUF4378) 790 964 IPR025486 -
Gso13g0371 985 MobiDBLite consensus disorder prediction 363 384 - -
Gso13g0371 985 MobiDBLite consensus disorder prediction 227 272 - -
Gso13g0371 985 MobiDBLite consensus disorder prediction 66 105 - -
Gso13g0371 985 MobiDBLite consensus disorder prediction 433 480 - -
Gso13g0371 985 MobiDBLite consensus disorder prediction 229 270 - -
Gso13g0371 985 MobiDBLite consensus disorder prediction 38 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0371 Gso-Chr13 15307231 15312777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0371 1 971 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 30.435 3.88e-84 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0371 - - gmx:100793602 1823.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0371 13 15307231 15312777 Gso19g0270 19 3854518 3859971 GST