Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0362 ATGAGGCTCCTTAGCATCATCACCACCTCCTTAACACTATTCTTCCTTCTTCTCTTTCTCTCCATAGAGCTCCAAGCGTACACCCCAGAAGACAACTTCACCATCAGTTGTGGCACCACCGGGATAGTCTTCGACGGCCAAAGGACATGGACGGGGGACGCAGACACAAAGTACTTATCTGGTGGTCAAGGCAGCACCGTTTTAACCCAAGCAGCAACACAAGATCCTTCTGTCAATCAAGTTCCCTACACCACAGCACGGTTATCCCCTTCTCAGTTCAATTACTCCTTCCCCGTTTCTGCGGGCCCCAAATTCGTTCGCCTCTTCTTCTACCCTGTTGATTACCCTTCCTTTCCCCGCACTCATGCCTCTTTCTCCGTTCAATCTAACGGATTCACCTTCTTAAAAGGTTTCAACGCCTCTCTAAACGCTGACGCGGAAGCCACCAAAACCATCTTCAGGGAATATGTGGTCAACGTCAACGACGGTGACATTCTCATCCTCAGCTTCACTCCCTCGCAACCTAACTCCTACGCTTTCATCAATGGAATCGAGGTGCTTTCCATGCCAAGTGATTTGTATTACACGTCAGCAACTGACTCAACAGGATTCAAGTTCTTGGGAAGTACCACGCTGTACAGCGTAGAAACCAGATTTGCGCTGCAGGCGGAGTATAGAATCAAAATGGGAGGGCAAGAAATATCACCACTAAACGACACCGGCTTGTTCAGGAAATGGACCGGTGACGAAGAAGATTATTTAATCAAACAAAATCCACAGAATAATGATCTTCCAGCCAACACGGATGGTAAGATGAACATAACCGTGAATCCTGATTACGTGGCACCCAAGGAACTCTACAGAGCAGGGCGTAGCATGGGCACAAACGCCACTCTGAACAAAATCAGCAACCTGACTTGGCAGTTCCCGGTTGATTCTGGCTTCACTTACGTTCTCAGGCTCCACTTTTGCGAGCTTGACCCCAATATTAATAAAGATGGTGACAGGGTGTTCTTCATTTACATAGCGAGCCAGTTGGCTGAGAACCACGCTGATGTTATGCAATGGAGCCACAATCAGAAAGGTCTCGCTGTGCAGAGAAACTATGCCGTTTTAATTCCGAAGGACAATACTCAGAAAAAGGTTAATCTCTCGCTTCGGATGGATCCTTATGCAACTAATGATAAAACGACATACAGCGACGCGTTCTTGAACGGTCTCGAGATCTTCAAAATCAGTGAGGCTGGGTCAAACAACCTTGCCGGACCTAACCCGGACCCGGTTCAGACTCCACACAACAACATACCCGCCCCAAAGGGAAACCGCAGCAGCAAAAGTGGAACGTCGATCGGCATCGTGGCAGGTGTGGTATCCGGCGTCGTTTTGATCTCACTCATCATCCTTTTCCTCATCGTCTTCTTCCGACGCAAGACAATCACTACGCCCAAGGACTACAACAAGTCCAAGTCCTCCGCGACCTCCAAGTGGGGCCCACTCTCCTTCACAACGACCAAGTCAACCACCACCACGAAGTCCTCCCTCCCCTCCGATCTATGCCGCCACTTCTCCCTCCCGGAGATCAAGTCCGCCACCAACAACTTCGACGACGTCTTCATCGTCGGCGTCGGCGGATTTGGCCACGTGTACAAAGGCTACATCGACAACGGCTCCACCCCCGTCGCCATCAAGCGCCTCAAGCCGGGTTCACAGCAAGGCGCGCACGAGTTCATGAACGAGATCGAGATGCTATCGCAGCTCCGCCACCTCCACCTCGTATCTCTCATAGGTTATTGCAACGAGAACAACGAGATGATCCTCGTCTACGACTTCATGGCGCGTGGAACCCTACGCGATCATCTATACAACACCGACAACCCCCCTCTGACGTGGAAGCAGCGCTTGCAGATCTGCATCGGCGCCGCGCGTGGACTTCATTACCTCCACACCGGCGCGAAGCACACGATCATCCACCGCGACGTGAAAACTACCAACATTTTGTTGGATGATAAGTGGGTGGCCAAGGTTTCGGACTTCGGGCTTTCGAGAATCGGGCCCACGGGCAACGCCAAGGCCCACGTCAGCACCGTTGTGAAAGGCAGCATTGGGTATTTGGACCCGGAGTATTATAAACGACAGCGTTTAACTGAGAAATCTGACGTGTATTCCTTTGGAGTGGTGCTGTTTGAGTTACTCTGCGCTCGTCCGCCTCTGATCAGAACTGCGGAGAAGAAACAGGTGTCGCTTGCTGATTGGGCGAGGCACTGCTGCCAAAATGGGACCATAGGCCAGATTGTGGACCCCACTTTAAAGGGGAGGATGGCGCCAGAGTGTTTGAGGAAATTCTGCGAGGTTGCGGTGAGTTGTTTGTTGGACGACGGAACGCTGAGGCCGTCGATGAACGACGTCGTTTGGATGCTGGAGTTTGCGTTGCAGTTGCAGGAGAGTGCTGAGCAGCGTGAAAATACTAATATTGTTGATAATGAAATTAATGAGAGAAGAGAGGAGGAGGCTAGTGATGATTTGTTTAGTACTGGAACCAGTGTGGGCCAGGTTTCGGATTTTAACAAGAGTAGCGGTGTGGTGAGTGTGAGTACTGATAGCGAAGAGCTTAGTAGTAGCTACAAAGAGAGTGATAAGTTGATGTCTGGGACTGTTTTCTCGGAGATTGTGGATCCAAAGCCACGTATAGCAATGATATTAACCGTGAGATTCAACAGCGTCACCTCCTTCGTACTCACCTTTCTCTTTCTCTCCATAGACCTCCAAGCGTACACCCCAGAAGACAACTTCACCATCAGTTGCGGCACCACCGGGATAGTCTTCGACGGCCAAAGGACATGGACGGGGGACGCACACACAAAGTATTTATCTGGTGGTCAAGGCAGCACCATTTTAACTGAAGCAGCAGCACAAGATCCTTCTGTCAATCAAGTTCCCTACACCACAGCACGGTTATCCCGTTTTCAGTTCAATTACTCCTTCCCCGTTTCTGCGGGCCCCAAATTCGTTCGCCTCTTCTTCTACCCTGCTGATTACCCTTCCTTTCCCCGCACTCATGCCTCTTTCTCCGTTCAATCTAACGGATTCACCTTCTTAAAAGGTTTCAACGCCTCTCTAAACGCTGACGCGGAAGCCACCAAAACCATCTTCAGGGAATATGTGGTCAACGTCAACGACGGTGACATTCTCATCCTCAGCTTCACTCCCTCGCAACCAAACTCCTACGCTTTCATCAATGGAATCGAAGTACTTTCCATGCCAAGTGATTTGTATTACACGTCAGCAACTGACTCAACAGGATTCAAGTTGGTCGGAAATACCACGCTGTACAGCGTAGAAACCAGATTTGCGCTGCAGGCGGAGTATAGAATCAAAATCGGAGGGCAAGAAATATCACCACTAAACGACACCGGTTTGTTCAGGAAATGGGCCGGTGACGAAGAAGATTATTTGATCAAACAAAATCCACAGAATAATGATCTTCCAGCTAACATGGATGGTAAGTTGAACATAAACGTGAATCCTGATTACGTGGCACCTAAGGAACTCTACAGAACAGCGCGTAACATGGGCACAAACGCCACTCTGAACAAAATCAGCAACCTGACTTGGGAGTTCCCGGTTGATTCTGGCTTCACTTACGTTCTCAGGCTCCACTTTTGCGAGTTTGACCCCAATATTAATAAAGATGGTGACAGGGTGTTCTTCATTTACATAGCGAGCCAGTTGGCTGAGGACAACGCTGATGTTATGCAATGGAGCCACAATCAGCAAGGTCTCGCTGTGCAGAGAAACTATGCCGTTTTAATTCCGAAGGATAATACTCAGAAAAAGGTTAATCTCTCGCTTCAGATGCATCCTTATGCAACTCCGGATAAAACGATATACAGCGACGCGTTCTTGAACGGTCTCGAGATCTTCAAAATAAGCCAGGACGAATCAAACAACCTTGCCGGACCTAACCCAGACCCGGTTCAGACTCCACATAGCAACAAATCAGTCCCAACGGGAAAGATCAGCAGAGGGAGCAGAGAGACGATAATTGGCATGATCGTGGGGGTGGTATCCGGCGTCGTTTTGATCTCGCTCGTCGTTTTCTTCGTCTTTTTGTCTCCAATTTCCAGGTGTGGTCCACTCTTGTTCTCAATGACCAAGTCAACAACGACGCATAATTCGTCGATGCCGTTGGATCTCTGCCGCCGCTTCTCCCTTCTCGAGATCTTAGCTGCCACCCAAAACTTCGACGACGTCCTCATTGTAGGTGTCGGGGGATTTGGCCACGTGTACAAGGGCTACATCGATGACGGTTCCACCCCTGTCGCCATCAAGCGCCTCAAACCGGGTTCACAACAGGGGGCTCACGAGTTTCTGAATGAAATTGAGATGCTCTCACAACTCCGCCATCGCCACCTCGTCTCTCTCATCGGCTACTGCAACGATAATAAGGAAATGATCCTGGTCTATGATTTCATGACACGTGGCAACCTCCGTGACCATCTCTACAACACCGATAACCCCACTCTACCGTGGAAGCAACGGTTGCAGATTTGCATCGGTGCCGCGCGTGGGCTGCATTATCTTCACACAGGCGCAAAGCACATGATCATCCACCGCGACGTTAAAACGACAAACATCTTATTGGATGATAAATGGGTGGCCAAGGTTTCAGACTTCGGGCTTTCCAGAATTGGGCCCACGGACACGTCCAAGTCCCATGTCAGCACCAATGTGAAGGGAAGCTTTGGATATTTAGACCCAGAGTATTATAAACGGTACCGTTTGACAGAGAAGTCTGATGTGTACTCTTTTGGAGTAGTACTGTTTGAGATACTATGCGCTCGACCGCCTCTGATCCGTAATGCAGAGACGGAACAGGTGTCGCTTGCCAATTGGGCCAGGCGCTGTTATCAAAATGGGACCATGGCACAGATTGTGGATCCCTCGTTGAAGGGGACTATCGCGCCCGAGTGCTTCAAGAAGTTTTGTGAGATTGGGATGAGTTGTTTGTTAGAAGATGGGATGCACAGGCCGTCGATAAACGATATCGTTTGGCTGCTTGAGTTTGCGCTGCAGCTGCAAGAGGATGCGGATCAGCGTGAAAATGGTGATATTGTTACAGATGAAAACAATGAAATAAAAAGAGGAAATTAG 5151 0.4954 MRLLSIITTSLTLFFLLLFLSIELQAYTPEDNFTISCGTTGIVFDGQRTWTGDADTKYLSGGQGSTVLTQAATQDPSVNQVPYTTARLSPSQFNYSFPVSAGPKFVRLFFYPVDYPSFPRTHASFSVQSNGFTFLKGFNASLNADAEATKTIFREYVVNVNDGDILILSFTPSQPNSYAFINGIEVLSMPSDLYYTSATDSTGFKFLGSTTLYSVETRFALQAEYRIKMGGQEISPLNDTGLFRKWTGDEEDYLIKQNPQNNDLPANTDGKMNITVNPDYVAPKELYRAGRSMGTNATLNKISNLTWQFPVDSGFTYVLRLHFCELDPNINKDGDRVFFIYIASQLAENHADVMQWSHNQKGLAVQRNYAVLIPKDNTQKKVNLSLRMDPYATNDKTTYSDAFLNGLEIFKISEAGSNNLAGPNPDPVQTPHNNIPAPKGNRSSKSGTSIGIVAGVVSGVVLISLIILFLIVFFRRKTITTPKDYNKSKSSATSKWGPLSFTTTKSTTTTKSSLPSDLCRHFSLPEIKSATNNFDDVFIVGVGGFGHVYKGYIDNGSTPVAIKRLKPGSQQGAHEFMNEIEMLSQLRHLHLVSLIGYCNENNEMILVYDFMARGTLRDHLYNTDNPPLTWKQRLQICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDDKWVAKVSDFGLSRIGPTGNAKAHVSTVVKGSIGYLDPEYYKRQRLTEKSDVYSFGVVLFELLCARPPLIRTAEKKQVSLADWARHCCQNGTIGQIVDPTLKGRMAPECLRKFCEVAVSCLLDDGTLRPSMNDVVWMLEFALQLQESAEQRENTNIVDNEINERREEEASDDLFSTGTSVGQVSDFNKSSGVVSVSTDSEELSSSYKESDKLMSGTVFSEIVDPKPRIAMILTVRFNSVTSFVLTFLFLSIDLQAYTPEDNFTISCGTTGIVFDGQRTWTGDAHTKYLSGGQGSTILTEAAAQDPSVNQVPYTTARLSRFQFNYSFPVSAGPKFVRLFFYPADYPSFPRTHASFSVQSNGFTFLKGFNASLNADAEATKTIFREYVVNVNDGDILILSFTPSQPNSYAFINGIEVLSMPSDLYYTSATDSTGFKLVGNTTLYSVETRFALQAEYRIKIGGQEISPLNDTGLFRKWAGDEEDYLIKQNPQNNDLPANMDGKLNINVNPDYVAPKELYRTARNMGTNATLNKISNLTWEFPVDSGFTYVLRLHFCEFDPNINKDGDRVFFIYIASQLAEDNADVMQWSHNQQGLAVQRNYAVLIPKDNTQKKVNLSLQMHPYATPDKTIYSDAFLNGLEIFKISQDESNNLAGPNPDPVQTPHSNKSVPTGKISRGSRETIIGMIVGVVSGVVLISLVVFFVFLSPISRCGPLLFSMTKSTTTHNSSMPLDLCRRFSLLEILAATQNFDDVLIVGVGGFGHVYKGYIDDGSTPVAIKRLKPGSQQGAHEFLNEIEMLSQLRHRHLVSLIGYCNDNKEMILVYDFMTRGNLRDHLYNTDNPTLPWKQRLQICIGAARGLHYLHTGAKHMIIHRDVKTTNILLDDKWVAKVSDFGLSRIGPTDTSKSHVSTNVKGSFGYLDPEYYKRYRLTEKSDVYSFGVVLFEILCARPPLIRNAETEQVSLANWARRCYQNGTMAQIVDPSLKGTIAPECFKKFCEIGMSCLLEDGMHRPSINDIVWLLEFALQLQEDADQRENGDIVTDENNEIKRGN* 1717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0362 1716 CDD STKc_IRAK 540 807 - -
Gso13g0362 1716 Pfam Malectin-like domain 932 1309 IPR024788 -
Gso13g0362 1716 Pfam Malectin-like domain 35 412 IPR024788 -
Gso13g0362 1716 Pfam Protein tyrosine and serine/threonine kinase 1420 1683 IPR001245 GO:0004672|GO:0006468
Gso13g0362 1716 Pfam Protein tyrosine and serine/threonine kinase 540 803 IPR001245 GO:0004672|GO:0006468
Gso13g0362 1716 PANTHER OS07G0166700 PROTEIN 913 1698 IPR045272 GO:0004714|GO:0006468
Gso13g0362 1716 PANTHER OS07G0166700 PROTEIN 17 837 IPR045272 GO:0004714|GO:0006468
Gso13g0362 1716 Gene3D - 929 1087 - -
Gso13g0362 1716 Gene3D - 1118 1312 - -
Gso13g0362 1716 Gene3D - 221 413 - -
Gso13g0362 1716 Gene3D - 32 190 - -
Gso13g0362 1716 ProSiteProfiles Protein kinase domain profile. 1414 1689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g0362 1716 Gene3D Transferase(Phosphotransferase) domain 1 1491 1713 - -
Gso13g0362 1716 Gene3D Transferase(Phosphotransferase) domain 1 611 835 - -
Gso13g0362 1716 Gene3D Phosphorylase Kinase; domain 1 497 610 - -
Gso13g0362 1716 Gene3D Phosphorylase Kinase; domain 1 1379 1490 - -
Gso13g0362 1716 MobiDBLite consensus disorder prediction 1317 1339 - -
Gso13g0362 1716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 655 667 IPR008271 GO:0004672|GO:0006468
Gso13g0362 1716 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 913 1698 - -
Gso13g0362 1716 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 17 837 - -
Gso13g0362 1716 ProSitePatterns Protein kinases ATP-binding region signature. 1420 1443 IPR017441 GO:0005524
Gso13g0362 1716 MobiDBLite consensus disorder prediction 420 444 - -
Gso13g0362 1716 SMART serkin_6 534 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g0362 1716 SMART serkin_6 1414 1689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g0362 1716 ProSiteProfiles Protein kinase domain profile. 534 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g0362 1716 SUPERFAMILY Protein kinase-like (PK-like) 1388 1689 IPR011009 -
Gso13g0362 1716 SUPERFAMILY Protein kinase-like (PK-like) 508 809 IPR011009 -
Gso13g0362 1716 ProSitePatterns Protein kinases ATP-binding region signature. 540 563 IPR017441 GO:0005524
Gso13g0362 1716 CDD STKc_IRAK 1420 1687 - -
Gso13g0362 1716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1535 1547 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0362 Gso-Chr13 15147560 15157030 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0362 22 895 Receptor kinase-like Gene Family AT3G51550 50.609 0.0 794
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso13g0362 Malectin_like 3.7e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0362 - - gsj:114381619 3343.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0362 13 15147560 15157030 Gso18g2211 18 55070876 55073923 PCT
Gso18g2211 18 55070876 55073923 Gso13g0362 13 15147560 15157030 PCT