Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso13g0362 | ATGAGGCTCCTTAGCATCATCACCACCTCCTTAACACTATTCTTCCTTCTTCTCTTTCTCTCCATAGAGCTCCAAGCGTACACCCCAGAAGACAACTTCACCATCAGTTGTGGCACCACCGGGATAGTCTTCGACGGCCAAAGGACATGGACGGGGGACGCAGACACAAAGTACTTATCTGGTGGTCAAGGCAGCACCGTTTTAACCCAAGCAGCAACACAAGATCCTTCTGTCAATCAAGTTCCCTACACCACAGCACGGTTATCCCCTTCTCAGTTCAATTACTCCTTCCCCGTTTCTGCGGGCCCCAAATTCGTTCGCCTCTTCTTCTACCCTGTTGATTACCCTTCCTTTCCCCGCACTCATGCCTCTTTCTCCGTTCAATCTAACGGATTCACCTTCTTAAAAGGTTTCAACGCCTCTCTAAACGCTGACGCGGAAGCCACCAAAACCATCTTCAGGGAATATGTGGTCAACGTCAACGACGGTGACATTCTCATCCTCAGCTTCACTCCCTCGCAACCTAACTCCTACGCTTTCATCAATGGAATCGAGGTGCTTTCCATGCCAAGTGATTTGTATTACACGTCAGCAACTGACTCAACAGGATTCAAGTTCTTGGGAAGTACCACGCTGTACAGCGTAGAAACCAGATTTGCGCTGCAGGCGGAGTATAGAATCAAAATGGGAGGGCAAGAAATATCACCACTAAACGACACCGGCTTGTTCAGGAAATGGACCGGTGACGAAGAAGATTATTTAATCAAACAAAATCCACAGAATAATGATCTTCCAGCCAACACGGATGGTAAGATGAACATAACCGTGAATCCTGATTACGTGGCACCCAAGGAACTCTACAGAGCAGGGCGTAGCATGGGCACAAACGCCACTCTGAACAAAATCAGCAACCTGACTTGGCAGTTCCCGGTTGATTCTGGCTTCACTTACGTTCTCAGGCTCCACTTTTGCGAGCTTGACCCCAATATTAATAAAGATGGTGACAGGGTGTTCTTCATTTACATAGCGAGCCAGTTGGCTGAGAACCACGCTGATGTTATGCAATGGAGCCACAATCAGAAAGGTCTCGCTGTGCAGAGAAACTATGCCGTTTTAATTCCGAAGGACAATACTCAGAAAAAGGTTAATCTCTCGCTTCGGATGGATCCTTATGCAACTAATGATAAAACGACATACAGCGACGCGTTCTTGAACGGTCTCGAGATCTTCAAAATCAGTGAGGCTGGGTCAAACAACCTTGCCGGACCTAACCCGGACCCGGTTCAGACTCCACACAACAACATACCCGCCCCAAAGGGAAACCGCAGCAGCAAAAGTGGAACGTCGATCGGCATCGTGGCAGGTGTGGTATCCGGCGTCGTTTTGATCTCACTCATCATCCTTTTCCTCATCGTCTTCTTCCGACGCAAGACAATCACTACGCCCAAGGACTACAACAAGTCCAAGTCCTCCGCGACCTCCAAGTGGGGCCCACTCTCCTTCACAACGACCAAGTCAACCACCACCACGAAGTCCTCCCTCCCCTCCGATCTATGCCGCCACTTCTCCCTCCCGGAGATCAAGTCCGCCACCAACAACTTCGACGACGTCTTCATCGTCGGCGTCGGCGGATTTGGCCACGTGTACAAAGGCTACATCGACAACGGCTCCACCCCCGTCGCCATCAAGCGCCTCAAGCCGGGTTCACAGCAAGGCGCGCACGAGTTCATGAACGAGATCGAGATGCTATCGCAGCTCCGCCACCTCCACCTCGTATCTCTCATAGGTTATTGCAACGAGAACAACGAGATGATCCTCGTCTACGACTTCATGGCGCGTGGAACCCTACGCGATCATCTATACAACACCGACAACCCCCCTCTGACGTGGAAGCAGCGCTTGCAGATCTGCATCGGCGCCGCGCGTGGACTTCATTACCTCCACACCGGCGCGAAGCACACGATCATCCACCGCGACGTGAAAACTACCAACATTTTGTTGGATGATAAGTGGGTGGCCAAGGTTTCGGACTTCGGGCTTTCGAGAATCGGGCCCACGGGCAACGCCAAGGCCCACGTCAGCACCGTTGTGAAAGGCAGCATTGGGTATTTGGACCCGGAGTATTATAAACGACAGCGTTTAACTGAGAAATCTGACGTGTATTCCTTTGGAGTGGTGCTGTTTGAGTTACTCTGCGCTCGTCCGCCTCTGATCAGAACTGCGGAGAAGAAACAGGTGTCGCTTGCTGATTGGGCGAGGCACTGCTGCCAAAATGGGACCATAGGCCAGATTGTGGACCCCACTTTAAAGGGGAGGATGGCGCCAGAGTGTTTGAGGAAATTCTGCGAGGTTGCGGTGAGTTGTTTGTTGGACGACGGAACGCTGAGGCCGTCGATGAACGACGTCGTTTGGATGCTGGAGTTTGCGTTGCAGTTGCAGGAGAGTGCTGAGCAGCGTGAAAATACTAATATTGTTGATAATGAAATTAATGAGAGAAGAGAGGAGGAGGCTAGTGATGATTTGTTTAGTACTGGAACCAGTGTGGGCCAGGTTTCGGATTTTAACAAGAGTAGCGGTGTGGTGAGTGTGAGTACTGATAGCGAAGAGCTTAGTAGTAGCTACAAAGAGAGTGATAAGTTGATGTCTGGGACTGTTTTCTCGGAGATTGTGGATCCAAAGCCACGTATAGCAATGATATTAACCGTGAGATTCAACAGCGTCACCTCCTTCGTACTCACCTTTCTCTTTCTCTCCATAGACCTCCAAGCGTACACCCCAGAAGACAACTTCACCATCAGTTGCGGCACCACCGGGATAGTCTTCGACGGCCAAAGGACATGGACGGGGGACGCACACACAAAGTATTTATCTGGTGGTCAAGGCAGCACCATTTTAACTGAAGCAGCAGCACAAGATCCTTCTGTCAATCAAGTTCCCTACACCACAGCACGGTTATCCCGTTTTCAGTTCAATTACTCCTTCCCCGTTTCTGCGGGCCCCAAATTCGTTCGCCTCTTCTTCTACCCTGCTGATTACCCTTCCTTTCCCCGCACTCATGCCTCTTTCTCCGTTCAATCTAACGGATTCACCTTCTTAAAAGGTTTCAACGCCTCTCTAAACGCTGACGCGGAAGCCACCAAAACCATCTTCAGGGAATATGTGGTCAACGTCAACGACGGTGACATTCTCATCCTCAGCTTCACTCCCTCGCAACCAAACTCCTACGCTTTCATCAATGGAATCGAAGTACTTTCCATGCCAAGTGATTTGTATTACACGTCAGCAACTGACTCAACAGGATTCAAGTTGGTCGGAAATACCACGCTGTACAGCGTAGAAACCAGATTTGCGCTGCAGGCGGAGTATAGAATCAAAATCGGAGGGCAAGAAATATCACCACTAAACGACACCGGTTTGTTCAGGAAATGGGCCGGTGACGAAGAAGATTATTTGATCAAACAAAATCCACAGAATAATGATCTTCCAGCTAACATGGATGGTAAGTTGAACATAAACGTGAATCCTGATTACGTGGCACCTAAGGAACTCTACAGAACAGCGCGTAACATGGGCACAAACGCCACTCTGAACAAAATCAGCAACCTGACTTGGGAGTTCCCGGTTGATTCTGGCTTCACTTACGTTCTCAGGCTCCACTTTTGCGAGTTTGACCCCAATATTAATAAAGATGGTGACAGGGTGTTCTTCATTTACATAGCGAGCCAGTTGGCTGAGGACAACGCTGATGTTATGCAATGGAGCCACAATCAGCAAGGTCTCGCTGTGCAGAGAAACTATGCCGTTTTAATTCCGAAGGATAATACTCAGAAAAAGGTTAATCTCTCGCTTCAGATGCATCCTTATGCAACTCCGGATAAAACGATATACAGCGACGCGTTCTTGAACGGTCTCGAGATCTTCAAAATAAGCCAGGACGAATCAAACAACCTTGCCGGACCTAACCCAGACCCGGTTCAGACTCCACATAGCAACAAATCAGTCCCAACGGGAAAGATCAGCAGAGGGAGCAGAGAGACGATAATTGGCATGATCGTGGGGGTGGTATCCGGCGTCGTTTTGATCTCGCTCGTCGTTTTCTTCGTCTTTTTGTCTCCAATTTCCAGGTGTGGTCCACTCTTGTTCTCAATGACCAAGTCAACAACGACGCATAATTCGTCGATGCCGTTGGATCTCTGCCGCCGCTTCTCCCTTCTCGAGATCTTAGCTGCCACCCAAAACTTCGACGACGTCCTCATTGTAGGTGTCGGGGGATTTGGCCACGTGTACAAGGGCTACATCGATGACGGTTCCACCCCTGTCGCCATCAAGCGCCTCAAACCGGGTTCACAACAGGGGGCTCACGAGTTTCTGAATGAAATTGAGATGCTCTCACAACTCCGCCATCGCCACCTCGTCTCTCTCATCGGCTACTGCAACGATAATAAGGAAATGATCCTGGTCTATGATTTCATGACACGTGGCAACCTCCGTGACCATCTCTACAACACCGATAACCCCACTCTACCGTGGAAGCAACGGTTGCAGATTTGCATCGGTGCCGCGCGTGGGCTGCATTATCTTCACACAGGCGCAAAGCACATGATCATCCACCGCGACGTTAAAACGACAAACATCTTATTGGATGATAAATGGGTGGCCAAGGTTTCAGACTTCGGGCTTTCCAGAATTGGGCCCACGGACACGTCCAAGTCCCATGTCAGCACCAATGTGAAGGGAAGCTTTGGATATTTAGACCCAGAGTATTATAAACGGTACCGTTTGACAGAGAAGTCTGATGTGTACTCTTTTGGAGTAGTACTGTTTGAGATACTATGCGCTCGACCGCCTCTGATCCGTAATGCAGAGACGGAACAGGTGTCGCTTGCCAATTGGGCCAGGCGCTGTTATCAAAATGGGACCATGGCACAGATTGTGGATCCCTCGTTGAAGGGGACTATCGCGCCCGAGTGCTTCAAGAAGTTTTGTGAGATTGGGATGAGTTGTTTGTTAGAAGATGGGATGCACAGGCCGTCGATAAACGATATCGTTTGGCTGCTTGAGTTTGCGCTGCAGCTGCAAGAGGATGCGGATCAGCGTGAAAATGGTGATATTGTTACAGATGAAAACAATGAAATAAAAAGAGGAAATTAG | 5151 | 0.4954 | MRLLSIITTSLTLFFLLLFLSIELQAYTPEDNFTISCGTTGIVFDGQRTWTGDADTKYLSGGQGSTVLTQAATQDPSVNQVPYTTARLSPSQFNYSFPVSAGPKFVRLFFYPVDYPSFPRTHASFSVQSNGFTFLKGFNASLNADAEATKTIFREYVVNVNDGDILILSFTPSQPNSYAFINGIEVLSMPSDLYYTSATDSTGFKFLGSTTLYSVETRFALQAEYRIKMGGQEISPLNDTGLFRKWTGDEEDYLIKQNPQNNDLPANTDGKMNITVNPDYVAPKELYRAGRSMGTNATLNKISNLTWQFPVDSGFTYVLRLHFCELDPNINKDGDRVFFIYIASQLAENHADVMQWSHNQKGLAVQRNYAVLIPKDNTQKKVNLSLRMDPYATNDKTTYSDAFLNGLEIFKISEAGSNNLAGPNPDPVQTPHNNIPAPKGNRSSKSGTSIGIVAGVVSGVVLISLIILFLIVFFRRKTITTPKDYNKSKSSATSKWGPLSFTTTKSTTTTKSSLPSDLCRHFSLPEIKSATNNFDDVFIVGVGGFGHVYKGYIDNGSTPVAIKRLKPGSQQGAHEFMNEIEMLSQLRHLHLVSLIGYCNENNEMILVYDFMARGTLRDHLYNTDNPPLTWKQRLQICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDDKWVAKVSDFGLSRIGPTGNAKAHVSTVVKGSIGYLDPEYYKRQRLTEKSDVYSFGVVLFELLCARPPLIRTAEKKQVSLADWARHCCQNGTIGQIVDPTLKGRMAPECLRKFCEVAVSCLLDDGTLRPSMNDVVWMLEFALQLQESAEQRENTNIVDNEINERREEEASDDLFSTGTSVGQVSDFNKSSGVVSVSTDSEELSSSYKESDKLMSGTVFSEIVDPKPRIAMILTVRFNSVTSFVLTFLFLSIDLQAYTPEDNFTISCGTTGIVFDGQRTWTGDAHTKYLSGGQGSTILTEAAAQDPSVNQVPYTTARLSRFQFNYSFPVSAGPKFVRLFFYPADYPSFPRTHASFSVQSNGFTFLKGFNASLNADAEATKTIFREYVVNVNDGDILILSFTPSQPNSYAFINGIEVLSMPSDLYYTSATDSTGFKLVGNTTLYSVETRFALQAEYRIKIGGQEISPLNDTGLFRKWAGDEEDYLIKQNPQNNDLPANMDGKLNINVNPDYVAPKELYRTARNMGTNATLNKISNLTWEFPVDSGFTYVLRLHFCEFDPNINKDGDRVFFIYIASQLAEDNADVMQWSHNQQGLAVQRNYAVLIPKDNTQKKVNLSLQMHPYATPDKTIYSDAFLNGLEIFKISQDESNNLAGPNPDPVQTPHSNKSVPTGKISRGSRETIIGMIVGVVSGVVLISLVVFFVFLSPISRCGPLLFSMTKSTTTHNSSMPLDLCRRFSLLEILAATQNFDDVLIVGVGGFGHVYKGYIDDGSTPVAIKRLKPGSQQGAHEFLNEIEMLSQLRHRHLVSLIGYCNDNKEMILVYDFMTRGNLRDHLYNTDNPTLPWKQRLQICIGAARGLHYLHTGAKHMIIHRDVKTTNILLDDKWVAKVSDFGLSRIGPTDTSKSHVSTNVKGSFGYLDPEYYKRYRLTEKSDVYSFGVVLFEILCARPPLIRNAETEQVSLANWARRCYQNGTMAQIVDPSLKGTIAPECFKKFCEIGMSCLLEDGMHRPSINDIVWLLEFALQLQEDADQRENGDIVTDENNEIKRGN* | 1717 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso13g0362 | 1716 | CDD | STKc_IRAK | 540 | 807 | - | - | |
Gso13g0362 | 1716 | Pfam | Malectin-like domain | 932 | 1309 | IPR024788 | - | |
Gso13g0362 | 1716 | Pfam | Malectin-like domain | 35 | 412 | IPR024788 | - | |
Gso13g0362 | 1716 | Pfam | Protein tyrosine and serine/threonine kinase | 1420 | 1683 | IPR001245 | GO:0004672|GO:0006468 | |
Gso13g0362 | 1716 | Pfam | Protein tyrosine and serine/threonine kinase | 540 | 803 | IPR001245 | GO:0004672|GO:0006468 | |
Gso13g0362 | 1716 | PANTHER | OS07G0166700 PROTEIN | 913 | 1698 | IPR045272 | GO:0004714|GO:0006468 | |
Gso13g0362 | 1716 | PANTHER | OS07G0166700 PROTEIN | 17 | 837 | IPR045272 | GO:0004714|GO:0006468 | |
Gso13g0362 | 1716 | Gene3D | - | 929 | 1087 | - | - | |
Gso13g0362 | 1716 | Gene3D | - | 1118 | 1312 | - | - | |
Gso13g0362 | 1716 | Gene3D | - | 221 | 413 | - | - | |
Gso13g0362 | 1716 | Gene3D | - | 32 | 190 | - | - | |
Gso13g0362 | 1716 | ProSiteProfiles | Protein kinase domain profile. | 1414 | 1689 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso13g0362 | 1716 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1491 | 1713 | - | - | |
Gso13g0362 | 1716 | Gene3D | Transferase(Phosphotransferase) domain 1 | 611 | 835 | - | - | |
Gso13g0362 | 1716 | Gene3D | Phosphorylase Kinase; domain 1 | 497 | 610 | - | - | |
Gso13g0362 | 1716 | Gene3D | Phosphorylase Kinase; domain 1 | 1379 | 1490 | - | - | |
Gso13g0362 | 1716 | MobiDBLite | consensus disorder prediction | 1317 | 1339 | - | - | |
Gso13g0362 | 1716 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 655 | 667 | IPR008271 | GO:0004672|GO:0006468 | |
Gso13g0362 | 1716 | PANTHER | RECEPTOR-LIKE PROTEIN KINASE FERONIA | 913 | 1698 | - | - | |
Gso13g0362 | 1716 | PANTHER | RECEPTOR-LIKE PROTEIN KINASE FERONIA | 17 | 837 | - | - | |
Gso13g0362 | 1716 | ProSitePatterns | Protein kinases ATP-binding region signature. | 1420 | 1443 | IPR017441 | GO:0005524 | |
Gso13g0362 | 1716 | MobiDBLite | consensus disorder prediction | 420 | 444 | - | - | |
Gso13g0362 | 1716 | SMART | serkin_6 | 534 | 809 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso13g0362 | 1716 | SMART | serkin_6 | 1414 | 1689 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso13g0362 | 1716 | ProSiteProfiles | Protein kinase domain profile. | 534 | 809 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso13g0362 | 1716 | SUPERFAMILY | Protein kinase-like (PK-like) | 1388 | 1689 | IPR011009 | - | |
Gso13g0362 | 1716 | SUPERFAMILY | Protein kinase-like (PK-like) | 508 | 809 | IPR011009 | - | |
Gso13g0362 | 1716 | ProSitePatterns | Protein kinases ATP-binding region signature. | 540 | 563 | IPR017441 | GO:0005524 | |
Gso13g0362 | 1716 | CDD | STKc_IRAK | 1420 | 1687 | - | - | |
Gso13g0362 | 1716 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1535 | 1547 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso13g0362 | Gso-Chr13 | 15147560 | 15157030 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso13g0362 | 22 | 895 | Receptor kinase-like Gene Family | AT3G51550 | 50.609 | 0.0 | 794 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CrRLK1L-1 | Gso13g0362 | Malectin_like | 3.7e-36 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso13g0362 | - | - | gsj:114381619 | 3343.52 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso13g0362 | 13 | 15147560 | 15157030 | Gso18g2211 | 18 | 55070876 | 55073923 | PCT | |
Gso18g2211 | 18 | 55070876 | 55073923 | Gso13g0362 | 13 | 15147560 | 15157030 | PCT |