Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0361 ATGAGGTTCAACAGTATCACCTCCGTAACAACACTCTTCCTCTTTCTCAGCCTCTTTACACACCTCCAAGCGTACATTCCAGTGGACAACTTTACCATCAGCTGCGGCACTACCGGAAAATCTTACGACGGGGAAAGGACATGGACGGGGGACACAGGTTCAACGTTCTTATCTCATCAAGACGGCACCGTTTCCGCTAATGCAACAACACAATCTCCTTCTACCAATCAAGTGCCCTACACCGCCGCACGCTTGTCCCGTTCCCGTTTCAGCTACTCCTTCCCAGTCTCCCCTGGCCCCAAATTCCTCCGCCTCTTCTTCTACCCTGCTGAGTACGCTTCCTTTCCTCGCTCCAATGCATCCTTCACCGTTCAATCCAACCAATTCACCCTTCTCCACGTTTTCAATGCCTCTCTAAAAGCGGAAAACACGAAAACCGTCTTCAGAGAATATGTCGTCAATGTGGACGGCGACAGTGAGAGGTTGAACCTCACCTTCACTCCGTCACAACCAAACTCCTACGCTTTCATCAACGGAATCGAGGTACTCTCCATGCCAAGCAATCTGTATTACACCTCAGCAAATGACAACGGTTTGAAGCTCGTGGGAACTGACACACTGTTCCCCATAAGAACCAACACTGCACTGGAGACAGAGTATAGAATCAAAGTGGGAGGGCAAGGAATCTCGCCACGAAACGACACTGGTTTGTTCAGGAACTGGGCTGGTCACGATGAAGATTATTTAATTAAACAAAAAAATCCACAGAATAGTGCTATAACAGGAAACACCAATGGTAAGATGAACATAACGGTAAATCCAGATTATGTGGCACCCAAGGAACTGTACAGAACAGCTCGTGTCATGGGCACAAACACGTCTATGAACAAAAGCCTCAAGTTGACTTGGGAGTTCCCTGTTGACTCTGGCTTCCACTACATGATCAGGTTCCACTTTTGCCAACTTGACCCCAATATTACTAACATCGGTGACAGGGTGTTCTCACTTTACATAGGGAGCGAGTTTCTTGATGTTATGAGATGGAGCCAGAAACAGAAAGGTGTCGCTGTGTACAAAGACTACGCCATTTTAATCCCCAAGAGTGATACTCAGAAACAGGTTAATCTCTCGCTCCAAATGATGAATCCTTATGAAAGTGCCAAGGATAAAGAAAACAATGACCCGTTTCTGAATGGTCTGGAGATCTTCAAAATCAGCGAGTTTAACAACCTTGCTGGACCTAACCTGCAGAACAACAACATGCTCGTCCAAGAAGGAAAGAACAGCAGCAGAACACTTAAAATTGTTGTAGCAGGGGTGGTATCTGGCGTTGTTGTTTTCTTCATCTTTTTGTGGGGGAGTTGCAAGTTCGGTCCTCTCTTGCTCTCGCAGGATGACGACATGCTGAATTGCAGGCAGAGGTGGCCGTTCAATCTCCTCTGCCAGCGCTTCTCCCTCATGGATATCAAAGCCGCCACCAACAACTTCAATAACGCCTCCCTCGTCGGTGTTGGAGGATTCGGCCACGTGTACATGGGCTACATTGACGGCATTTCCATCCCGGTGGCTATCAAGCGTCTCAAGGCGGGTTCGAAGCAGGGGTCCGAAGAGTTCCTGACCGAGATCAAGATGCTCTCGCAGATCCGCCACCGCCATCTCGTTCCTCTCATCGGCTACTGCAACAACAACAAGGAGATGATCTTGGTCTATGATTTCATGACACGTGGCAATCTCCGTGACCATCTCTACAACACCGACAAACCCCCTATATCGTGGAAGCAACGTTTGCAGATATGTATTGGCGCCGCCCATGGGTTGTATTATCTTCACAAATGTGCCGGGAAATACATGATCATCCATAGTGACGTGAAAACCACCAACATCTTGTTGGATGATGACTGGGTGGCCAAGGTTTCGGACTTTGGGCTTTCCAGATTTGGGCCCATGGACTCATCCCATGCCTATGGCAGCACCACCGCTGTAAGAGGCAGCTTTGGGTATATAGACCCAGAGTATTATAAGCGGCATCATTTGACGGACAAGTCTGACGTGTACGCTTTCGGGGTAGTGTTGTTTGAGGTACTGTGCGCTCGTCCGCCTCTTATACGCAATGAAGATCCCAAACAGGAGTCGCTTGCTAAGTGGGTTAGGTACTGTTACCAAAGTGGGACCATGGACCAGATTGTGGACCCCACGTTGAAGGGGAGGATCGCGCCTGAATGCTTCCGGAGGTTTTGCCATATTGGGGTGAGTTGTTTGTCAGAGGTTGGGACGCAGAGGCCGTCGATGAAAGATGTTGTTTTCATGTTGGAGTCTACTCTGCAGGTGCAAGAGAGCGCGGAGAATGTAAAAAGAGGAAATTAG 2364 0.486 MRFNSITSVTTLFLFLSLFTHLQAYIPVDNFTISCGTTGKSYDGERTWTGDTGSTFLSHQDGTVSANATTQSPSTNQVPYTAARLSRSRFSYSFPVSPGPKFLRLFFYPAEYASFPRSNASFTVQSNQFTLLHVFNASLKAENTKTVFREYVVNVDGDSERLNLTFTPSQPNSYAFINGIEVLSMPSNLYYTSANDNGLKLVGTDTLFPIRTNTALETEYRIKVGGQGISPRNDTGLFRNWAGHDEDYLIKQKNPQNSAITGNTNGKMNITVNPDYVAPKELYRTARVMGTNTSMNKSLKLTWEFPVDSGFHYMIRFHFCQLDPNITNIGDRVFSLYIGSEFLDVMRWSQKQKGVAVYKDYAILIPKSDTQKQVNLSLQMMNPYESAKDKENNDPFLNGLEIFKISEFNNLAGPNLQNNNMLVQEGKNSSRTLKIVVAGVVSGVVVFFIFLWGSCKFGPLLLSQDDDMLNCRQRWPFNLLCQRFSLMDIKAATNNFNNASLVGVGGFGHVYMGYIDGISIPVAIKRLKAGSKQGSEEFLTEIKMLSQIRHRHLVPLIGYCNNNKEMILVYDFMTRGNLRDHLYNTDKPPISWKQRLQICIGAAHGLYYLHKCAGKYMIIHSDVKTTNILLDDDWVAKVSDFGLSRFGPMDSSHAYGSTTAVRGSFGYIDPEYYKRHHLTDKSDVYAFGVVLFEVLCARPPLIRNEDPKQESLAKWVRYCYQSGTMDQIVDPTLKGRIAPECFRRFCHIGVSCLSEVGTQRPSMKDVVFMLESTLQVQESAENVKRGN* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0361 787 PANTHER OS07G0166700 PROTEIN 480 783 IPR045272 GO:0004714|GO:0006468
Gso13g0361 787 PANTHER OS07G0166700 PROTEIN 16 446 IPR045272 GO:0004714|GO:0006468
Gso13g0361 787 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 16 446 - -
Gso13g0361 787 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 480 783 - -
Gso13g0361 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Gso13g0361 787 SUPERFAMILY Protein kinase-like (PK-like) 475 776 IPR011009 -
Gso13g0361 787 ProSitePatterns Protein kinases ATP-binding region signature. 502 525 IPR017441 GO:0005524
Gso13g0361 787 CDD STKc_IRAK 502 771 - -
Gso13g0361 787 Gene3D - 215 406 - -
Gso13g0361 787 Gene3D - 30 186 - -
Gso13g0361 787 Gene3D Phosphorylase Kinase; domain 1 481 572 - -
Gso13g0361 787 ProSiteProfiles Protein kinase domain profile. 496 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g0361 787 Gene3D Transferase(Phosphotransferase) domain 1 573 786 - -
Gso13g0361 787 SMART serkin_6 496 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g0361 787 Pfam Malectin-like domain 33 405 IPR024788 -
Gso13g0361 787 Pfam Protein tyrosine and serine/threonine kinase 501 767 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0361 Gso-Chr13 15142679 15145527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0361 25 786 Receptor kinase-like Gene Family AT3G51550 45.031 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso13g0361 Malectin_like 2.7e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0361 - - gmx:106795448 1546.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2213 18 55098463 55101564 Gso13g0361 13 15142679 15145527 PCT