Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0360 ATGACGACGCAACCAGCAGCAGCAGCAACACCTTTGAAAGTAATTCAAGTTTGTTCAGTGGCACCGCTTCAAGAACCATCCCTTTCCACCGTCGTTGTTCCAACCTCTCTCACACTAACCTTCTTCGACCTCTTGTGGCTACGCTTCCCACCTGTTGAGCGTCTCTTCTTCTACTCCTTCCCACACCCCACCTCTTCATTTCTTCACTCCCTTCTCCCCACTCTCCAACACTCTCTCTCCCTCACTCTCCATCACTTCCTCCCTTTCGCTGGCACCCTCACATGGCCCTCTCACTCTCCCAAACCCATCATCAACTACACCCCCGGCGACGCCGTTTCATTCACTGTCGCCGAATCCAACCAAAACTTCAACAACCTCACTTCTCGTCTGTGTGAAGCATCGCAACGACACCGTTTGATACCCCACTTGACCGCTTCCCATGACAAAGCGTCTGTGTTGGCACTTCAAGTAACAGTGTTCCCAAACGCTGGTTTTTGCATTGGAATAACCACACACCATGCAGCTTTCGACGGAAAATCTTCAACCATGTTCATCAAATCATGGGCTTATACATGCTCCAACCTAATTCAAAACAACAACACACCGTTATTTTTATTACCTCAGCATCTCACACCGTTCTTTGACAGATCAGTGATAAGAGACCCTTCTGGAATTGCTGAAGCCTACGTGGACGCGTGGCAGGAGAGTAGCGGACCAAACAATCGAAGCCTCAAGGTGTGGGAATCCTTCACCGAAATACCGAGTGATGGATGCAAAGGTGTATTTGAGTTAACACCTTCACAAATTCAGAAGCTAAAGCAACATGCAAAGTCTAAGCTTATGAAAACGAAGGACTTTTCGTTTTCGACGTTTGCTGTTACGTGTGCTTATGTGTTGACTTGCTTGGTCAAAGCAAAACAACCAGAGGAAGATGATGTGGGTTTCGTATTTTCTGTGGACTGTAGATCCCGCTTGAATCCTCCGATTCCTGCAACGTATTTTGGGAACTGCGTCGCGGGGCAAAAGGTTGTGGCTGTGACAAAGAACTTGGTTGGAATAAGCGATGGTTTTATCAGTGCTTTGGAAGGGATAAGTGAGGCTTTGAATATAGTGAAGGGTGAGGGAGTGCTGAGTGGAGCAGAAACTTGGGTTTCGTTAATGCTTGAAAGAGGGGAGAGTGTGCTTCGATTGTTCAGTATTGCTGGATCGCCATTGTTTGAGGTTTATGGCACTGATTTTGGTTGGGGAAGGCCAAAGAAAGTGGACATGACTTCCATAGATGGAACGGGAGCGTTTTCTCTTAGTGAAAGTAGGGATAACAGTGGAGGAATTGAGATTGGTTTGATGTTATGTCAACGTGAGATGGAAGCTTTTAGTACCCTTTTTGTTGGAGGACATGAATCCTTTTAA 1410 0.4667 MTTQPAAAATPLKVIQVCSVAPLQEPSLSTVVVPTSLTLTFFDLLWLRFPPVERLFFYSFPHPTSSFLHSLLPTLQHSLSLTLHHFLPFAGTLTWPSHSPKPIINYTPGDAVSFTVAESNQNFNNLTSRLCEASQRHRLIPHLTASHDKASVLALQVTVFPNAGFCIGITTHHAAFDGKSSTMFIKSWAYTCSNLIQNNNTPLFLLPQHLTPFFDRSVIRDPSGIAEAYVDAWQESSGPNNRSLKVWESFTEIPSDGCKGVFELTPSQIQKLKQHAKSKLMKTKDFSFSTFAVTCAYVLTCLVKAKQPEEDDVGFVFSVDCRSRLNPPIPATYFGNCVAGQKVVAVTKNLVGISDGFISALEGISEALNIVKGEGVLSGAETWVSLMLERGESVLRLFSIAGSPLFEVYGTDFGWGRPKKVDMTSIDGTGAFSLSESRDNSGGIEIGLMLCQREMEAFSTLFVGGHESF* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0360 469 Gene3D - 12 244 IPR023213 -
Gso13g0360 469 PANTHER - 9 468 - -
Gso13g0360 469 SUPERFAMILY CoA-dependent acyltransferases 284 427 - -
Gso13g0360 469 Pfam Transferase family 36 459 - -
Gso13g0360 469 Gene3D - 254 465 IPR023213 -
Gso13g0360 469 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 9 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0360 Gso-Chr13 15123728 15125477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0360 29 462 Monolignol Biosynthesis Gene Families AT5G48930 26.419 1.33e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0360 - - gmx:100800849 912.138