Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0356 ATGGCCTCCTCCGAGATTAACTGGGACAGGCTAGATAAAAAGAAGTTCTTTGTCGTGGGAGCAGGACTCTTTACGGGTGTTACAGTGGCACTCTACCCGGTATCTGTTGTGAAGACTAGGCTGCAGGTTGCCTCAAAGGATACTTTGGAGAGAAGTGTGTTTTCTGTTGTGAAAGGGTTGCTTAAAACGGATGGCATCCCTGGTTTGTATAAAGGGTTTGGTACAGTTATCACTGGCGCAATTCCTACCAGAATCATATTCCTCACTGCCTTGGAGACGACAAAGGTGGCTTCCTTCAGGATGGTGGAGCCATTTAGACTATCTGAAACTAATCAGGCGGCCATAGCAAATGGAATTGCAGGCATGGCATCATCATTTTTGGCACAATCTCTGTTTGTTCCAATTGATGTGGTTAGCCAAAAGTTGATGGTGCAAGGATACTCAGGCCATGCCCAATATAGTGGGGGTTTGGATGTTGCTCGTAAGGTGTTAAGGTCTGATGGCATCAGGGGATTATATAGAGGATTTGGTCTATCTGTCATGACTTATGTACCATCTAATGCTGTATGGTGGGCAAGTTACGGTTCAAGTCAACGCTACTTATGGAGATTCTTGGGAGATAATAATGAGGAAGATACTCCTAGTCTACCAAAGATTATTTTTGCTCAGGCTACTGGAGGGATCATTGCTGGTGCTACTGCATCCTGCATTACAACCCCATTGGATACTATCAAGACACGGTTACAGGTGATGGGACTTGAAAAGAAAATCTCTGTAAAACAAGTTGTTAAAGATTTGATCACTGAGGATGGATGGAAAGGTGTATATAGAGGATTAGGTCCAAGATTTTTCAGCATGTCAGCATGGGGTACTTCAATGATATTGGCTTATGAATATCTGAAACGCTTGTGTGCAAAAGATGGAGGAGGCAATTGA 936 0.4359 MASSEINWDRLDKKKFFVVGAGLFTGVTVALYPVSVVKTRLQVASKDTLERSVFSVVKGLLKTDGIPGLYKGFGTVITGAIPTRIIFLTALETTKVASFRMVEPFRLSETNQAAIANGIAGMASSFLAQSLFVPIDVVSQKLMVQGYSGHAQYSGGLDVARKVLRSDGIRGLYRGFGLSVMTYVPSNAVWWASYGSSQRYLWRFLGDNNEEDTPSLPKIIFAQATGGIIAGATASCITTPLDTIKTRLQVMGLEKKISVKQVVKDLITEDGWKGVYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDGGGN* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0356 311 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Gso13g0356 311 PRINTS Mitochondrial carrier protein signature 173 191 IPR002067 GO:0055085
Gso13g0356 311 PRINTS Mitochondrial carrier protein signature 227 249 IPR002067 GO:0055085
Gso13g0356 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 200 IPR018108 -
Gso13g0356 311 Pfam Mitochondrial carrier protein 115 202 IPR018108 -
Gso13g0356 311 Pfam Mitochondrial carrier protein 24 96 IPR018108 -
Gso13g0356 311 Pfam Mitochondrial carrier protein 221 306 IPR018108 -
Gso13g0356 311 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 1 309 - -
Gso13g0356 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 218 303 IPR018108 -
Gso13g0356 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 14 97 IPR018108 -
Gso13g0356 311 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 309 - -
Gso13g0356 311 SUPERFAMILY Mitochondrial carrier 9 300 IPR023395 -
Gso13g0356 311 Gene3D Mitochondrial carrier domain 15 308 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0356 Gso-Chr13 15066574 15072457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0356 6 305 Chloroplast and Mitochondria Gene Families AT5G15640 75.329 2.90e-168 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0356 K15121 - gmx:100819519 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0356 13 15066574 15072457 Gso19g0292 19 4315222 4320745 GST
Gso13g0356 13 15066574 15072457 Gso18g2221 18 55182346 55186851 PCT
Gso13g0356 13 15066574 15072457 Gso8g2052 8 21816603 21821450 PCT
Gso18g2221 18 55182346 55186851 Gso13g0356 13 15066574 15072457 PCT
Gso8g2052 8 21816603 21821450 Gso13g0356 13 15066574 15072457 PCT