Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0351 ATGTGTGTTTGTGTGCACTCTTTTGGTGACTACAACAGAAGAGGCTGTACCTTCTTTTTGAAGTCTCTGTGGGTAGGATTTGGAGTGGGAGCACCAATGGCTTTGTTGATGACAATTGTAGTAGGTGTCGTCTTGCTGCTCTGTTTTTGCTCTGCTCTCTTGAGGTGGAATGAAGTAAGGTACAGGAAGAAAGGTTTGCCTCCTGGCACAATGGGTTGGCCACTTTTTGGGGAGACAACTGAGTTTCTTAAGCAGGGTCCAAACTTCATGAAAACCCAGAGATCAAGGTATGGCAGTTTTTTCAAATCTCACATACTTGGTTGTCCTACCATTGTTTCCATGGATCCAGAGCTTAATAGATACATCCTAATGAATGAAGCAAAAGGCCTTGTTCCTGGATACCCTCAATCCATGTTGGATATCTTAGGCAAATGCAACATTGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGAGCACTGCTTTCCATCATTAGCCCCACCTTGATCAGAGATCAGCTTTTGCAAAAAATTGATCAGTTCATGAGAGCCCACCTTAGCAACTGGGATGACAAAGTCATCAATATTCAAGAGAAAACTAAAGAGATGGCCTTCCTCTCATCCCTGAAGCAGATTGCTGGAATGGAATCTGGCTCATTATCTGACTCATTGATGGCAGAGTTCTTTAAGCTAGTTCTAGGAACCCTTTCTCTCCCTATTAACCTTCCTAGCACAAACTACCACCATGGATTCCAGGCAAGGAAGACTATAGTGAAAATTCTTAGTAAACTCCTAGAGGAAAGAAGAGCATCACATGAAACCTACCATGACATGCTTGGTTGCTTGATGGGAAGAGATGAAAGTAGATACAAACTAAGTGATGAAGAAATCATTGATCTAGTGATTACAATTACGTATTCTGGTTATGAAACTGTTTCAACTACATCAATGATGGCAGTGAAGTACCTCCATGACCATCCCAAAGCTCTTGAAGAACTCAGAAAAGAGCATTTGGCCATAAGAGAGAGGAAAAAGCCAGATGAACCTCTTGACTGCAATGATCTCAAGTCAATGAAGTTTACTCGTGCGGTGATATTTGAGACCTCTAGATTGGCTACAATAGTTAATGGGGTCCTAAGGAAAACCACTCAAGACATGGAACTAAACGGCTATTTGATCCCCAAAGGATGGAGAATATATGTGTATACAAGAGAGATAAATTATGACCCTTTTCTATATCCTGATCCACTAACATTCAACCCATGGAGATGGATGGATAAGAGTCTAGAATCTAAAAACTACTTCTTCATATTTGGAGGAGGCACCAGACAGTGTCCAGGAAAAGAGTTGGGAATAACAGAAATTTCCACTTTCTTACACTACTTTGTAACTAGATACAGGTGGGAAGAAGTAGGAGGAGATAAAGTAATGAGATTTCCTAGAGTTGAGGCACCTAATGGACTGCACATAAGGGTGAGATCTTACTAA 1491 0.4138 MCVCVHSFGDYNRRGCTFFLKSLWVGFGVGAPMALLMTIVVGVVLLLCFCSALLRWNEVRYRKKGLPPGTMGWPLFGETTEFLKQGPNFMKTQRSRYGSFFKSHILGCPTIVSMDPELNRYILMNEAKGLVPGYPQSMLDILGKCNIAAVHGSTHKYMRGALLSIISPTLIRDQLLQKIDQFMRAHLSNWDDKVINIQEKTKEMAFLSSLKQIAGMESGSLSDSLMAEFFKLVLGTLSLPINLPSTNYHHGFQARKTIVKILSKLLEERRASHETYHDMLGCLMGRDESRYKLSDEEIIDLVITITYSGYETVSTTSMMAVKYLHDHPKALEELRKEHLAIRERKKPDEPLDCNDLKSMKFTRAVIFETSRLATIVNGVLRKTTQDMELNGYLIPKGWRIYVYTREINYDPFLYPDPLTFNPWRWMDKSLESKNYFFIFGGGTRQCPGKELGITEISTFLHYFVTRYRWEEVGGDKVMRFPRVEAPNGLHIRVRSY* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0351 496 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0351 496 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0351 496 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0351 496 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0351 496 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0351 496 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0351 496 PANTHER CYTOCHROME P450 26 38 494 - -
Gso13g0351 496 SUPERFAMILY Cytochrome P450 60 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0351 496 Gene3D Cytochrome P450 57 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0351 496 Pfam Cytochrome P450 67 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0351 496 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0351 496 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0351 496 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0351 496 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0351 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Gso13g0351 496 PANTHER CYTOCHROME P450 FAMILY PROTEIN 38 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0351 Gso-Chr13 15033326 15036861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0351 114 496 Cytochrome P450 AT5G38970 70.573 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0351 K09590 - gmx:100779967 946.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0351 13 15033326 15036861 Gso19g0297 19 4377964 4381869 GST
Gso13g0351 13 15033326 15036861 Gso18g2227 18 55219396 55223658 PCT
Gso13g0351 13 15033326 15036861 Gso8g2057 8 21911304 21915436 PCT
Gso18g2227 18 55219396 55223658 Gso13g0351 13 15033326 15036861 PCT
Gso8g2057 8 21911304 21915436 Gso13g0351 13 15033326 15036861 PCT