LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso13g0351	ATGTGTGTTTGTGTGCACTCTTTTGGTGACTACAACAGAAGAGGCTGTACCTTCTTTTTGAAGTCTCTGTGGGTAGGATTTGGAGTGGGAGCACCAATGGCTTTGTTGATGACAATTGTAGTAGGTGTCGTCTTGCTGCTCTGTTTTTGCTCTGCTCTCTTGAGGTGGAATGAAGTAAGGTACAGGAAGAAAGGTTTGCCTCCTGGCACAATGGGTTGGCCACTTTTTGGGGAGACAACTGAGTTTCTTAAGCAGGGTCCAAACTTCATGAAAACCCAGAGATCAAGGTATGGCAGTTTTTTCAAATCTCACATACTTGGTTGTCCTACCATTGTTTCCATGGATCCAGAGCTTAATAGATACATCCTAATGAATGAAGCAAAAGGCCTTGTTCCTGGATACCCTCAATCCATGTTGGATATCTTAGGCAAATGCAACATTGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGAGCACTGCTTTCCATCATTAGCCCCACCTTGATCAGAGATCAGCTTTTGCAAAAAATTGATCAGTTCATGAGAGCCCACCTTAGCAACTGGGATGACAAAGTCATCAATATTCAAGAGAAAACTAAAGAGATGGCCTTCCTCTCATCCCTGAAGCAGATTGCTGGAATGGAATCTGGCTCATTATCTGACTCATTGATGGCAGAGTTCTTTAAGCTAGTTCTAGGAACCCTTTCTCTCCCTATTAACCTTCCTAGCACAAACTACCACCATGGATTCCAGGCAAGGAAGACTATAGTGAAAATTCTTAGTAAACTCCTAGAGGAAAGAAGAGCATCACATGAAACCTACCATGACATGCTTGGTTGCTTGATGGGAAGAGATGAAAGTAGATACAAACTAAGTGATGAAGAAATCATTGATCTAGTGATTACAATTACGTATTCTGGTTATGAAACTGTTTCAACTACATCAATGATGGCAGTGAAGTACCTCCATGACCATCCCAAAGCTCTTGAAGAACTCAGAAAAGAGCATTTGGCCATAAGAGAGAGGAAAAAGCCAGATGAACCTCTTGACTGCAATGATCTCAAGTCAATGAAGTTTACTCGTGCGGTGATATTTGAGACCTCTAGATTGGCTACAATAGTTAATGGGGTCCTAAGGAAAACCACTCAAGACATGGAACTAAACGGCTATTTGATCCCCAAAGGATGGAGAATATATGTGTATACAAGAGAGATAAATTATGACCCTTTTCTATATCCTGATCCACTAACATTCAACCCATGGAGATGGATGGATAAGAGTCTAGAATCTAAAAACTACTTCTTCATATTTGGAGGAGGCACCAGACAGTGTCCAGGAAAAGAGTTGGGAATAACAGAAATTTCCACTTTCTTACACTACTTTGTAACTAGATACAGGTGGGAAGAAGTAGGAGGAGATAAAGTAATGAGATTTCCTAGAGTTGAGGCACCTAATGGACTGCACATAAGGGTGAGATCTTACTAA	1491	0.4138	MCVCVHSFGDYNRRGCTFFLKSLWVGFGVGAPMALLMTIVVGVVLLLCFCSALLRWNEVRYRKKGLPPGTMGWPLFGETTEFLKQGPNFMKTQRSRYGSFFKSHILGCPTIVSMDPELNRYILMNEAKGLVPGYPQSMLDILGKCNIAAVHGSTHKYMRGALLSIISPTLIRDQLLQKIDQFMRAHLSNWDDKVINIQEKTKEMAFLSSLKQIAGMESGSLSDSLMAEFFKLVLGTLSLPINLPSTNYHHGFQARKTIVKILSKLLEERRASHETYHDMLGCLMGRDESRYKLSDEEIIDLVITITYSGYETVSTTSMMAVKYLHDHPKALEELRKEHLAIRERKKPDEPLDCNDLKSMKFTRAVIFETSRLATIVNGVLRKTTQDMELNGYLIPKGWRIYVYTREINYDPFLYPDPLTFNPWRWMDKSLESKNYFFIFGGGTRQCPGKELGITEISTFLHYFVTRYRWEEVGGDKVMRFPRVEAPNGLHIRVRSY*	497

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gso13g0351	496	PRINTS	E-class P450 group I signature	94	113	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gso13g0351	496	PRINTS	E-class P450 group I signature	297	314	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gso13g0351	496	PRINTS	E-class P450 group I signature	363	381	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gso13g0351	496	PRINTS	E-class P450 group I signature	403	427	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gso13g0351	496	PRINTS	E-class P450 group I signature	436	446	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gso13g0351	496	PRINTS	E-class P450 group I signature	446	469	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gso13g0351	496	PANTHER	CYTOCHROME P450 26	38	494	-	-
Gso13g0351	496	SUPERFAMILY	Cytochrome P450	60	493	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gso13g0351	496	Gene3D	Cytochrome P450	57	495	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gso13g0351	496	Pfam	Cytochrome P450	67	477	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso13g0351	Gso-Chr13	15033326	15036861	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso13g0351	114	496	Cytochrome P450	AT5G38970	70.573	0.0	568

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso13g0351	K09590		-	gmx:100779967	946.421

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Event-related genes

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Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
Gso13g0351	13	15033326	15036861	Gso19g0297	19	4377964	4381869	GST
Gso13g0351	13	15033326	15036861	Gso18g2227	18	55219396	55223658	PCT
Gso13g0351	13	15033326	15036861	Gso8g2057	8	21911304	21915436	PCT
Gso18g2227	18	55219396	55223658	Gso13g0351	13	15033326	15036861	PCT
Gso8g2057	8	21911304	21915436	Gso13g0351	13	15033326	15036861	PCT

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