Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0339 ATGGCTCACTCCCCTTTTCTTTTGTTGCCAAATCTTCAAGGCTTTTGGCCTTCTTTGCTTGCTATGATCACTTGCTTTATCATTATGATCAAAGCCCTAAGAAACAACTTCATTGAGAACTATTCCAACAAGCAAAAACCAAAACTACCCCCAGGCCCGAAACCATGGCCTATAGTTGGAAACCTTCCCGAAATGCTTGCAAACAAACCTGCCCATAAGTGGATACACAATCTCATGAAAGAAATGAACACCGAAATTGCGTGTATCCGCTTAGGAAACGCCTATGTTATCCCTGTGACATGCCCCACCATTGCGAGGGAGTTCTTGAGAAAACAAGATGCAACTTTTGCATCAAGGTCACAAAGTGTGTCCACTGATCTCATTAGTAATGGATATTCAACCACCATTTTTGGGCCCTTTGGAGCCCAATGGAAGAAAATGAAGAAAATTTTAACCAATGATTTGCTTTCCCCGCACAAACACCTATGGCTGCATGGCCAAAGGACTGAAGAAGCAGACAACCTTATGTTTCACGTCTACAACAAGTGCAAAAATGTGAACGATGGTGTTGGTGGCCTTGTGAATATCAGAAGTGTTGCAAGGCATTATTGTGGTAACCTAACCAGGAAAATTATTTTCAATACAAGGTACTTTGGGAAGGGTAGAGAGGATGGAGGGCCAGGTTTTGAGGAAGTGGAACATGTTGATTCCATCTTCGATTTGCTCAAGTACGTTTATGCCTTTTCTGTTTCTGATTATATGCCATGCTTGAGGGGACTTGACTTGGATGGCCATGAAAAGAATGTGAAAGAAGCTTTAAAGATCATCAAGAAGTATCATGATCCCATTGTTCAAGAGAGAATTAAGCTGTGGAATGATGGATTAAAGGTTGATGAAGAGGACTGGCTTGATGTTCTGGTCTCCTTGAAAGATTCCAACAATAACCCATTATTGACGTTGGAGGAGATCAATGCACAAATTATAGAATTGATGCTTGCAACAATTGACAATCCATCAAATGCTTTTGAATGGGCACTTGCTGAAATGATAAACCAACCGGAGTTACTCCACCGAGCCGTTGAAGAATTGGATAGTGTGGTAGGAAAAGAGAGACTGGTCCAAGAATCAGATATACCTAAACTCAACTATGTGAAGGCTTGTGCAAGAGAAGCTCTTCGCCTTCATCCCATTGCACCTTTTATTCCTCCCCATGTCTCTATGAGTGACACAATGGTGGGAAATTACTTCATCCCTAAGGGTAGCCATGTAATGCTAAGCAGACAAGAGCTTGGGAGGAACCCAAAAGTGTGGAATGAAACCTACAAGTTCAAACCTGAACGCCACCTCAAGAGTGATGGGTCTGATGTGGATTTGACAGAACCAAATTTGAAGTTCATATCATTTAGCACAGGAAGGCGTGGCTGTCCCGGAGTGATGCTTGGCACCACAATGACAGTGATGCTATTTGCTAGATTGCTCCATGGCTTCACTTGGACTGCACCACCTAATGTTTCATCAATCAACCTTGCTGAGTCCAACGATGATATCCTTCTTGCAGAACCACTTGTGGCAGTGGCTAAGCCAAGATTAGCATCAGAGCTATACCAACTTTAA 1614 0.4257 MAHSPFLLLPNLQGFWPSLLAMITCFIIMIKALRNNFIENYSNKQKPKLPPGPKPWPIVGNLPEMLANKPAHKWIHNLMKEMNTEIACIRLGNAYVIPVTCPTIAREFLRKQDATFASRSQSVSTDLISNGYSTTIFGPFGAQWKKMKKILTNDLLSPHKHLWLHGQRTEEADNLMFHVYNKCKNVNDGVGGLVNIRSVARHYCGNLTRKIIFNTRYFGKGREDGGPGFEEVEHVDSIFDLLKYVYAFSVSDYMPCLRGLDLDGHEKNVKEALKIIKKYHDPIVQERIKLWNDGLKVDEEDWLDVLVSLKDSNNNPLLTLEEINAQIIELMLATIDNPSNAFEWALAEMINQPELLHRAVEELDSVVGKERLVQESDIPKLNYVKACAREALRLHPIAPFIPPHVSMSDTMVGNYFIPKGSHVMLSRQELGRNPKVWNETYKFKPERHLKSDGSDVDLTEPNLKFISFSTGRRGCPGVMLGTTMTVMLFARLLHGFTWTAPPNVSSINLAESNDDILLAEPLVAVAKPRLASELYQL* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0339 537 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 17 535 - -
Gso13g0339 537 Pfam Cytochrome P450 50 521 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0339 537 Gene3D Cytochrome P450 42 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0339 537 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 17 535 - -
Gso13g0339 537 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0339 537 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0339 537 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0339 537 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0339 537 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0339 537 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g0339 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Gso13g0339 537 SUPERFAMILY Cytochrome P450 50 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0339 Gso-Chr13 14803751 14806253 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0339 2 535 Cytochrome P450 AT4G39950 53.084 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0339 - K14984 gmx:100809902 1083.55