LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso13g0339	ATGGCTCACTCCCCTTTTCTTTTGTTGCCAAATCTTCAAGGCTTTTGGCCTTCTTTGCTTGCTATGATCACTTGCTTTATCATTATGATCAAAGCCCTAAGAAACAACTTCATTGAGAACTATTCCAACAAGCAAAAACCAAAACTACCCCCAGGCCCGAAACCATGGCCTATAGTTGGAAACCTTCCCGAAATGCTTGCAAACAAACCTGCCCATAAGTGGATACACAATCTCATGAAAGAAATGAACACCGAAATTGCGTGTATCCGCTTAGGAAACGCCTATGTTATCCCTGTGACATGCCCCACCATTGCGAGGGAGTTCTTGAGAAAACAAGATGCAACTTTTGCATCAAGGTCACAAAGTGTGTCCACTGATCTCATTAGTAATGGATATTCAACCACCATTTTTGGGCCCTTTGGAGCCCAATGGAAGAAAATGAAGAAAATTTTAACCAATGATTTGCTTTCCCCGCACAAACACCTATGGCTGCATGGCCAAAGGACTGAAGAAGCAGACAACCTTATGTTTCACGTCTACAACAAGTGCAAAAATGTGAACGATGGTGTTGGTGGCCTTGTGAATATCAGAAGTGTTGCAAGGCATTATTGTGGTAACCTAACCAGGAAAATTATTTTCAATACAAGGTACTTTGGGAAGGGTAGAGAGGATGGAGGGCCAGGTTTTGAGGAAGTGGAACATGTTGATTCCATCTTCGATTTGCTCAAGTACGTTTATGCCTTTTCTGTTTCTGATTATATGCCATGCTTGAGGGGACTTGACTTGGATGGCCATGAAAAGAATGTGAAAGAAGCTTTAAAGATCATCAAGAAGTATCATGATCCCATTGTTCAAGAGAGAATTAAGCTGTGGAATGATGGATTAAAGGTTGATGAAGAGGACTGGCTTGATGTTCTGGTCTCCTTGAAAGATTCCAACAATAACCCATTATTGACGTTGGAGGAGATCAATGCACAAATTATAGAATTGATGCTTGCAACAATTGACAATCCATCAAATGCTTTTGAATGGGCACTTGCTGAAATGATAAACCAACCGGAGTTACTCCACCGAGCCGTTGAAGAATTGGATAGTGTGGTAGGAAAAGAGAGACTGGTCCAAGAATCAGATATACCTAAACTCAACTATGTGAAGGCTTGTGCAAGAGAAGCTCTTCGCCTTCATCCCATTGCACCTTTTATTCCTCCCCATGTCTCTATGAGTGACACAATGGTGGGAAATTACTTCATCCCTAAGGGTAGCCATGTAATGCTAAGCAGACAAGAGCTTGGGAGGAACCCAAAAGTGTGGAATGAAACCTACAAGTTCAAACCTGAACGCCACCTCAAGAGTGATGGGTCTGATGTGGATTTGACAGAACCAAATTTGAAGTTCATATCATTTAGCACAGGAAGGCGTGGCTGTCCCGGAGTGATGCTTGGCACCACAATGACAGTGATGCTATTTGCTAGATTGCTCCATGGCTTCACTTGGACTGCACCACCTAATGTTTCATCAATCAACCTTGCTGAGTCCAACGATGATATCCTTCTTGCAGAACCACTTGTGGCAGTGGCTAAGCCAAGATTAGCATCAGAGCTATACCAACTTTAA	1614	0.4257	MAHSPFLLLPNLQGFWPSLLAMITCFIIMIKALRNNFIENYSNKQKPKLPPGPKPWPIVGNLPEMLANKPAHKWIHNLMKEMNTEIACIRLGNAYVIPVTCPTIAREFLRKQDATFASRSQSVSTDLISNGYSTTIFGPFGAQWKKMKKILTNDLLSPHKHLWLHGQRTEEADNLMFHVYNKCKNVNDGVGGLVNIRSVARHYCGNLTRKIIFNTRYFGKGREDGGPGFEEVEHVDSIFDLLKYVYAFSVSDYMPCLRGLDLDGHEKNVKEALKIIKKYHDPIVQERIKLWNDGLKVDEEDWLDVLVSLKDSNNNPLLTLEEINAQIIELMLATIDNPSNAFEWALAEMINQPELLHRAVEELDSVVGKERLVQESDIPKLNYVKACAREALRLHPIAPFIPPHVSMSDTMVGNYFIPKGSHVMLSRQELGRNPKVWNETYKFKPERHLKSDGSDVDLTEPNLKFISFSTGRRGCPGVMLGTTMTVMLFARLLHGFTWTAPPNVSSINLAESNDDILLAEPLVAVAKPRLASELYQL*	538

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso13g0339	537	PANTHER	FLAVONOID 3'-MONOOXYGENASE-RELATED	17	535	-	-
	Gso13g0339	537	Pfam	Cytochrome P450	50	521	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gso13g0339	537	Gene3D	Cytochrome P450	42	534	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gso13g0339	537	PANTHER	P450 FAMILY PROTEIN, PUTATIVE-RELATED	17	535	-	-
	Gso13g0339	537	PRINTS	E-class P450 group I signature	104	125	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gso13g0339	537	PRINTS	E-class P450 group I signature	342	368	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gso13g0339	537	PRINTS	E-class P450 group I signature	385	403	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gso13g0339	537	PRINTS	E-class P450 group I signature	426	450	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gso13g0339	537	PRINTS	E-class P450 group I signature	465	475	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gso13g0339	537	PRINTS	E-class P450 group I signature	475	498	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso13g0339	Gso-Chr13	14803751	14806253	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso13g0339	2	535	Cytochrome P450	AT4G39950	53.084	0.0	592

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso13g0339	-		K14984	gmx:100809902	1083.55

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