Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0335 ATGACTATTGGAAGTCTTGAATATAAGGCAAAGAACACAAAATCAAGGAAGAACAAATTAGTTGTTGATGAGAAGGCGCCTTTGATACCTAAGACTCATGATGCTGATGCTGAAGGTTTTGATGAATTCAATGGTGCTTCATTTTCTGGGGCAGTTTTCAACTTATCCACCACAGCTATTGGTGCTGGGATCATGGGGTTGCCAGCATGTGTGAAAAAGTTGGGGATGGTGCCTGGTCTTCTTGCTATTATCTTAACTGCTTTGTTGACAGAGAAGTCAATTGGGTTCATGATCAGGAATTCCCGGGCAGGGAATCTTTCTTCTTATGGGAATCTCGTGGGGGATTCATTTGGCAAATTCGGAAAAGCTCTGGTGCAAATATGCGTTATAATCAACAACATTGGAATGCTGATTATTTACATGATTATTATTGGTGATGTGATTTCTGGAACATCTTCTTCTAGTGAATTTCATCATTCTGGTGTACTTGAAGGATGGTTTGGAGTTCACTGGTGGACAGGTCGTACATTTGTTCTTCTTTTTACAACATTTGCTGTGTTTGCACCTTTGTCATGCTTCAAGCGAATTGATTCGTTGAGATACACTTCTGCATTATCATTTGGCTTAGCAGTTGCTTTTCTTGTTATTGCTGTGGGAATCTCAATTTTCAAGATTTCAATTGGAGGCATTGGGATGCCCAGACTCTTCCCAATCATTACTGACGTAGCCTCAGTTTTTGAACTGTTCACTGTAACTCCTGTGGTTGTGACAGCCTATTTATGCCACTTCAATGTTCACAGCATAGATAATGAACTGGAGGACTCCTCGCAGATAAATGGGATTGTGCGTACTTCCCTTGCTCTATGTGCTTCAGTGTACTTGCTAACAAGCTTCTTTGGGTTCCTCCTATTTGGTGAAGGAACTCTTGATGATGTGCTTGCCAATTTTGACATTGATCTTGGAATTCCTTTTGGTTCTGTGCTCAACGATGCTGTTCGTTTTAGCTATGCCGCACATCTTGTGCTTGTATTTCCAGTTGTCTTCTATGCAGTGCGGATCAACCTTGATGGTCTCATATTTCCATCATCTAGGCCTTTGGTTCTAGATAACTTCAGATTTGCATCAATTACTATGGTCCTTATTGTTGCTTCCTTTTTGGGAGCAAATTTCATACCCAGCATTTGGGATATATTCCAGTTCACCGGAGCAACAGCTGCTGCATGTTTATCATTCATATTTCCATCTGCCATCACCCTAAGGGATCGATACAACATTGCAACTAAAAAAGACAAGATTCTATCAGTGTTTATGATAGTCCTCGCAGTCTTGGCGAATGTTGTGGCTGTATACAGTGATGCCTTTGCCCTGATCAAGAATAGTATAACTAAACGTGAATGA 1398 0.4077 MTIGSLEYKAKNTKSRKNKLVVDEKAPLIPKTHDADAEGFDEFNGASFSGAVFNLSTTAIGAGIMGLPACVKKLGMVPGLLAIILTALLTEKSIGFMIRNSRAGNLSSYGNLVGDSFGKFGKALVQICVIINNIGMLIIYMIIIGDVISGTSSSSEFHHSGVLEGWFGVHWWTGRTFVLLFTTFAVFAPLSCFKRIDSLRYTSALSFGLAVAFLVIAVGISIFKISIGGIGMPRLFPIITDVASVFELFTVTPVVVTAYLCHFNVHSIDNELEDSSQINGIVRTSLALCASVYLLTSFFGFLLFGEGTLDDVLANFDIDLGIPFGSVLNDAVRFSYAAHLVLVFPVVFYAVRINLDGLIFPSSRPLVLDNFRFASITMVLIVASFLGANFIPSIWDIFQFTGATAAACLSFIFPSAITLRDRYNIATKKDKILSVFMIVLAVLANVVAVYSDAFALIKNSITKRE* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0335 465 Pfam Transmembrane amino acid transporter protein 46 450 IPR013057 -
Gso13g0335 465 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 461 - -
Gso13g0335 465 PANTHER AMINO ACID TRANSPORTER 7 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0335 Gso-Chr13 14759595 14764766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0335 21 459 Amino Acid or Auxin Permease AAAP Family AT5G38820 62.812 0.0 574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0335 13 14759595 14764766 Gso19g0330 19 5290143 5294441 GST