Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0335 ATGACTATTGGAAGTCTTGAATATAAGGCAAAGAACACAAAATCAAGGAAGAACAAATTAGTTGTTGATGAGAAGGCGCCTTTGATACCTAAGACTCATGATGCTGATGCTGAAGGTTTTGATGAATTCAATGGTGCTTCATTTTCTGGGGCAGTTTTCAACTTATCCACCACAGCTATTGGTGCTGGGATCATGGGGTTGCCAGCATGTGTGAAAAAGTTGGGGATGGTGCCTGGTCTTCTTGCTATTATCTTAACTGCTTTGTTGACAGAGAAGTCAATTGGGTTCATGATCAGGAATTCCCGGGCAGGGAATCTTTCTTCTTATGGGAATCTCGTGGGGGATTCATTTGGCAAATTCGGAAAAGCTCTGGTGCAAATATGCGTTATAATCAACAACATTGGAATGCTGATTATTTACATGATTATTATTGGTGATGTGATTTCTGGAACATCTTCTTCTAGTGAATTTCATCATTCTGGTGTACTTGAAGGATGGTTTGGAGTTCACTGGTGGACAGGTCGTACATTTGTTCTTCTTTTTACAACATTTGCTGTGTTTGCACCTTTGTCATGCTTCAAGCGAATTGATTCGTTGAGATACACTTCTGCATTATCATTTGGCTTAGCAGTTGCTTTTCTTGTTATTGCTGTGGGAATCTCAATTTTCAAGATTTCAATTGGAGGCATTGGGATGCCCAGACTCTTCCCAATCATTACTGACGTAGCCTCAGTTTTTGAACTGTTCACTGTAACTCCTGTGGTTGTGACAGCCTATTTATGCCACTTCAATGTTCACAGCATAGATAATGAACTGGAGGACTCCTCGCAGATAAATGGGATTGTGCGTACTTCCCTTGCTCTATGTGCTTCAGTGTACTTGCTAACAAGCTTCTTTGGGTTCCTCCTATTTGGTGAAGGAACTCTTGATGATGTGCTTGCCAATTTTGACATTGATCTTGGAATTCCTTTTGGTTCTGTGCTCAACGATGCTGTTCGTTTTAGCTATGCCGCACATCTTGTGCTTGTATTTCCAGTTGTCTTCTATGCAGTGCGGATCAACCTTGATGGTCTCATATTTCCATCATCTAGGCCTTTGGTTCTAGATAACTTCAGATTTGCATCAATTACTATGGTCCTTATTGTTGCTTCCTTTTTGGGAGCAAATTTCATACCCAGCATTTGGGATATATTCCAGTTCACCGGAGCAACAGCTGCTGCATGTTTATCATTCATATTTCCATCTGCCATCACCCTAAGGGATCGATACAACATTGCAACTAAAAAAGACAAGATTCTATCAGTGTTTATGATAGTCCTCGCAGTCTTGGCGAATGTTGTGGCTGTATACAGTGATGCCTTTGCCCTGATCAAGAATAGTATAACTAAACGTGAATGA 1398 0.4077 MTIGSLEYKAKNTKSRKNKLVVDEKAPLIPKTHDADAEGFDEFNGASFSGAVFNLSTTAIGAGIMGLPACVKKLGMVPGLLAIILTALLTEKSIGFMIRNSRAGNLSSYGNLVGDSFGKFGKALVQICVIINNIGMLIIYMIIIGDVISGTSSSSEFHHSGVLEGWFGVHWWTGRTFVLLFTTFAVFAPLSCFKRIDSLRYTSALSFGLAVAFLVIAVGISIFKISIGGIGMPRLFPIITDVASVFELFTVTPVVVTAYLCHFNVHSIDNELEDSSQINGIVRTSLALCASVYLLTSFFGFLLFGEGTLDDVLANFDIDLGIPFGSVLNDAVRFSYAAHLVLVFPVVFYAVRINLDGLIFPSSRPLVLDNFRFASITMVLIVASFLGANFIPSIWDIFQFTGATAAACLSFIFPSAITLRDRYNIATKKDKILSVFMIVLAVLANVVAVYSDAFALIKNSITKRE* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0335 465 Pfam Transmembrane amino acid transporter protein 46 450 IPR013057 -
Gso13g0335 465 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 461 - -
Gso13g0335 465 PANTHER AMINO ACID TRANSPORTER 7 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0335 Gso-Chr13 14759595 14764766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0335 21 459 Amino Acid or Auxin Permease AAAP Family AT5G38820 62.812 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0335 K14207 - gmx:100799425 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0335 13 14759595 14764766 Gso19g0330 19 5290143 5294441 GST