Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0326 ATGAAATTCATTGTACTCTTCTTCCTCCTAGCATCATCATCATCATATTCATATGCTCAATCCCCTGTAGCACTAGTAGTGGCTCATGTCCCTTCCACCAGAGCAATGCTCCCCATGTTACTCGTGATCTTCCTCTTCGCCCTCCTCTTCACCGCATTTTGCTCCATCTTCATTCGCTACTGCTCCCACGAAGAACAACCCCAGGCGCTTCCACAAGCCACGCGCGTGCTCGCCACGTGTCCCGTCACGTCCTACTCCGCAGTCAAAATGAGGACACCGCAAAACCCTGTGTTTCAGTGTGCGATGTGTTTGGCGGAGTTCAACGACGCCGACGACGCGCTCCACTTGCTACCCAAGTGCGGTCACGTGTTCCACGCGCACTGCATCGACGCGTAG 396 0.5404 MKFIVLFFLLASSSSYSYAQSPVALVVAHVPSTRAMLPMLLVIFLFALLFTAFCSIFIRYCSHEEQPQALPQATRVLATCPVTSYSAVKMRTPQNPVFQCAMCLAEFNDADDALHLLPKCGHVFHAHCIDA* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0326 131 Pfam RING-like zinc finger 99 129 IPR001841 -
Gso13g0326 131 PANTHER RING FINGER DOMAIN-CONTAINING 28 131 - -
Gso13g0326 131 PANTHER RING-H2 FINGER PROTEIN ATL17-RELATED 28 131 - -
Gso13g0326 131 SUPERFAMILY RING/U-box 99 130 - -
Gso13g0326 131 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 56 131 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0326 Gso-Chr13 14623206 14623601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0326 5 131 Rapid Response to Elicitors AT3G05200 34.932 4.29e-18 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0326 - K10664 gmx:121173267 252.677