Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0319 ATGGCAACACGCGTGATCCCTCCGAGAATCCTCAAGAATCTTCGTTACAACACAACAACCAAGCCCCTCAACGCCGCCCAACCCTCCATCTCTCCGGCCATCGCCTCACCGTCGCTCTTCGAGAGGTCGCCGTCCCCTCCTGCCGCGGACGTCATTCCGGCATCTGCGGCTGGGACGGCAGCGCTCAACCTGGACGACGCGGAGCGGCTATTCGCATCGGTGTCGACAAAGAGGCTGCTCCGGTCGTCCGCAGTTCTGCACGCGACGGCGGTGGGGCCCATGGTGGACCTGGGAATGTGGATGATGAAGTCGAGGGTGTTCCAGAGCGGGCTGCTGAAGGATCTCGTCATGGCCGCCACGAAAGAGACGTTCTTCTCGCACTTCTGCGCCGGCGAGGACGCCGCCTCCGCCGGACGGAGCATCCGCGCGCTCAACGACGCCGGCTTACGTGGCATGCTGGTGTATGGTGTGGAAGACGCGCATGAAAACGATGGGTGTGACAGAAACCTCAATGGGTTCCTTCACACTGTGGATGTTAGCAAATCGCTTCCACCATCCTCTGTGAGTTTTGTCATTGTGAAAATCACTGCAATATGCCCCATGGCATTGTTAGAAAGAATGAGTGACCTTCTTAGATGGCAACAAAAAGACCCTTCATTCGTTTTGCCATGGAAGCAAGATTCCCTCCCAATTTTCGCTGAGTCTAGTCCTTTGTACCACACACAGAAGAGACCGGAGCCTCTAACCCCAGAAGAAGAGAGTGATCTTCAACTTGCCAACCAGAGACTCCTTGAACTTTGCCAAAAATGTGAGGAAGCCAATATGCCTTTGTTGGTTGATGCAGAACACACCACGGTTCAGCCGGCTATTGATTACTTCACATACTCTTCATCCATAAGGCACAACAAGGATGACAACCCCATTGTGTTTGGAACCATTCAAACTTACTTGAAAGATGCCAAGGAGAGGTTGTTACTCACAACAAAGGCAGCAGAGAAAATGGGAGTTCCAATGGGGTTCAAATTGGTGAGGGGTGCCTACATGTCTACAGAGAGTAAATTGGCTGAGTCTTTTGGATATGCATCTCCAATTCACAATACCATTCAAGATACACACAATTGCTTCAATGATTGTTCATCATTTCTGCTTGAGAAAATTGCAAACGGACCTGGTTCAGTTGTTCTTGCAACCCACAATATTGAATCAGGAAAATTGGCTGCAACAAAAGCATATGAATTGGGGGTTGGAAAGGTGAACCACAAGCTAGAATTTGCACAACTATATGGAATGTCAGAGGCACTTTCCTTTGGTTTGAGCAATGCAGGGTTTCAGGTTAGCAAGTATATGCCATTTGGGCCAGTAGATATGGTTATGCCTTACCTTTTGAGAAGGGCTGAAGAAAATAGAGGGCTCTTAGCTGCTTCAGGTTTTGATAGACAACTGATGAGAAAGGAGTTGGGAAGGAGACTAAAAGCTGCAGTGTTCTAA 1488 0.4973 MATRVIPPRILKNLRYNTTTKPLNAAQPSISPAIASPSLFERSPSPPAADVIPASAAGTAALNLDDAERLFASVSTKRLLRSSAVLHATAVGPMVDLGMWMMKSRVFQSGLLKDLVMAATKETFFSHFCAGEDAASAGRSIRALNDAGLRGMLVYGVEDAHENDGCDRNLNGFLHTVDVSKSLPPSSVSFVIVKITAICPMALLERMSDLLRWQQKDPSFVLPWKQDSLPIFAESSPLYHTQKRPEPLTPEEESDLQLANQRLLELCQKCEEANMPLLVDAEHTTVQPAIDYFTYSSSIRHNKDDNPIVFGTIQTYLKDAKERLLLTTKAAEKMGVPMGFKLVRGAYMSTESKLAESFGYASPIHNTIQDTHNCFNDCSSFLLEKIANGPGSVVLATHNIESGKLAATKAYELGVGKVNHKLEFAQLYGMSEALSFGLSNAGFQVSKYMPFGPVDMVMPYLLRRAEENRGLLAASGFDRQLMRKELGRRLKAAVF* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0319 495 PANTHER PROLINE OXIDASE 1 493 IPR015659 GO:0004657|GO:0006562
Gso13g0319 495 PANTHER PROLINE DEHYDROGENASE 1 493 - -
Gso13g0319 495 Pfam Proline dehydrogenase 140 470 IPR002872 -
Gso13g0319 495 SUPERFAMILY FAD-linked oxidoreductase 131 492 IPR029041 -
Gso13g0319 495 Gene3D - 99 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0319 Gso-Chr13 14563305 14567039 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0319 K00318 - gmx:100797464 963.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0319 13 14563305 14567039 Gso19g1039 19 38072988 38075425 GST
Gso13g0319 13 14563305 14567039 Gso18g2284 18 55720896 55724088 PCT
Gso13g0319 13 14563305 14567039 Gso8g2104 8 22883584 22885579 PCT
Gso18g2284 18 55720896 55724088 Gso13g0319 13 14563305 14567039 PCT
Gso8g2104 8 22883584 22885579 Gso13g0319 13 14563305 14567039 PCT