Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0301 ATGGATCCCTCTCGCCGTGCCCCACGCGCCGTGATCGACCCCGTCCCGAAGATCCGGCAAGTTGGGTTCTTCGCCCCGCCCGAGCGCTCCCAGTCGGGTCCTCTCGACCCGACCCACTCCTCTCCCCCAATCTCCAACTCCCTCTCCCCCGTCATGATCCCGCCCCCGCGCCACCTCTCCGACAACCTCCTCCTCCATGACCCCCGCCCTGCCGCCTCTCCCCTCTCCTCCGCCTCCGCCGTCGCCGCTGCCGGAAGCGGAAACTCCTTCGACTCCGCGGACTTCTTCCCCGCCCCACTCTCTCCTGCGATGCCGTCTTCTTCGTACTCCAGCAGGATTGCCACCGGCGGCGCCAGCGACGGTGGGTACTTCAAGGGGAACGGCGCCGGCGGAAAGTTGGCGGCGTCGTCGTTTCCCCGCGGAGGATTCGACTTGACCGCGATGAAGGCGGCGAGCCTTGTGCCGGCGAGCGAGTTGACTACGGTTTCCGTGGTGAATGATTCGCTCGGGATACCTGAAAAAGAAAAAGGAAACAAAACAGGAGGGTCAGCAGTGGAAGTGAAGGACCAACCTAATAGTTCAAAGCAGCAGAAGCCAAAACCGAAAACCTCAAAAGCTGAAAGACGTGCACTCCAAGAAGCTCAACGGGCTGCAAAGGCTGCTGAAAAAGGTGAAGGAAGTAAGGCATCTGGAACTGCGGCTTCAACGAATCCAAAACCAGCTAAAGCTGTAAAGCCTGCACAGAAAGTTGATAATGCAGCAATTGCAGCCTCTGAAAAGAAGGGAGGTGAGATTCCACCAGAAAAGGATAGAAAGAAAGATGCTCCTCAACCACGCTTGCAGTATGACGACAAGAGCCGAGTGGAGAAAGCTAAACGTCGTGCAGTGGTGAAACAAACTGAAGCTAGGAACAGAGTTGAGTTGTTCAGGCATTTACCACAATATGAACGTGGGAGTCAGCTTCCAGATCTTGAGGCAAAGTTTTTCCATCTTTCTCCAGTGCACCCTCTTGTTTATAAGGTGGGCTTGCAGTATCTAACTGGAGATATATCTGGTGGCAATGCTCGTTGCATTGCAATGCTTCAAGCATTTCAAGAGGCCATCAAAGACTACAAGGTTCCACCTGAGAAGACTCTTGTGAGAGACTTGACAGCAAAAATTGGTAGTTATGTATCATTTCTTATTGAGTGTCGACCTCTGTCAATCAGCATGGGAAATGCAATTAGATTTCTCAAAAGTCGGATAGCCAAGCTACCTTTGACCTTGTCTGAATCAGAAGCAAAAGCTTCTCTCGAGTCAGATATTGAGTGCTTTATAAGTGAAAAGATTATACTTGCCAACAAGGTGATAGTGAAGCATGCTGTCACCAAAATAAGAGATGGTGATGTTCTTCTAACTTTTGGGTCTTCATCTGCTGTTGAAATGATACTATTGCATGCACATGAGTTGGGAAGACAGTTTCGTGTTGTGGTAGTTGACTCTCGTCCGAAGCTTAGAGGGCAACTTTTACTTCGCCGGCTTGTGGAGAACGGTCTTAGCTGTACATACACTCATATAAATGCTGTTTCCTACATAATGCACGAAGTTACTCGAGTTTTTCTGGGTGCTTCAGCAGTTTTGTCTAATGGAACAGTATATTCAAGAGTGGGGACTGCATGTGTTGCAATGGTTGCTCATGCATTCCGTGTACCTGTCATAGTATGTTGTGAGGCCTATAAATTTCATGAACGGGTACAGTTGGATTCAATATGCTCAAATGAGCTTGGCAATCCAGATGTCATTTCAAATGTACTGGGTAGAGAGGATGTCAAACACTTGGATGGCTGGGCCAATATTGAAAATCTGCAACTTTTAAATCTGGTTTATGATGCAACACCTTCAGATTATGTTTCAATGATTGTCACAGATTATGGCATGGTTCCCCCCACAAGTGTGCCTGTAATTGTAAGAGAATATGGGAGAGAACAGGTCTGGATATAA 1980 0.4909 MDPSRRAPRAVIDPVPKIRQVGFFAPPERSQSGPLDPTHSSPPISNSLSPVMIPPPRHLSDNLLLHDPRPAASPLSSASAVAAAGSGNSFDSADFFPAPLSPAMPSSSYSSRIATGGASDGGYFKGNGAGGKLAASSFPRGGFDLTAMKAASLVPASELTTVSVVNDSLGIPEKEKGNKTGGSAVEVKDQPNSSKQQKPKPKTSKAERRALQEAQRAAKAAEKGEGSKASGTAASTNPKPAKAVKPAQKVDNAAIAASEKKGGEIPPEKDRKKDAPQPRLQYDDKSRVEKAKRRAVVKQTEARNRVELFRHLPQYERGSQLPDLEAKFFHLSPVHPLVYKVGLQYLTGDISGGNARCIAMLQAFQEAIKDYKVPPEKTLVRDLTAKIGSYVSFLIECRPLSISMGNAIRFLKSRIAKLPLTLSESEAKASLESDIECFISEKIILANKVIVKHAVTKIRDGDVLLTFGSSSAVEMILLHAHELGRQFRVVVVDSRPKLRGQLLLRRLVENGLSCTYTHINAVSYIMHEVTRVFLGASAVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGNPDVISNVLGREDVKHLDGWANIENLQLLNLVYDATPSDYVSMIVTDYGMVPPTSVPVIVREYGREQVWI* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0301 659 MobiDBLite consensus disorder prediction 200 223 - -
Gso13g0301 659 MobiDBLite consensus disorder prediction 162 291 - -
Gso13g0301 659 MobiDBLite consensus disorder prediction 262 291 - -
Gso13g0301 659 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 659 - -
Gso13g0301 659 Coils Coil 204 224 - -
Gso13g0301 659 Gene3D - 445 652 IPR042529 -
Gso13g0301 659 MobiDBLite consensus disorder prediction 33 47 - -
Gso13g0301 659 PANTHER TRANSLATION INITIATION FACTOR EIF-2B DELTA SUBUNIT 1 659 - -
Gso13g0301 659 SUPERFAMILY NagB/RpiA/CoA transferase-like 334 652 IPR037171 -
Gso13g0301 659 MobiDBLite consensus disorder prediction 18 85 - -
Gso13g0301 659 Pfam Initiation factor 2 subunit family 350 642 IPR000649 GO:0044237
Gso13g0301 659 MobiDBLite consensus disorder prediction 185 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0301 Gso-Chr13 14284136 14288879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0301 4 659 Eukaryotic Initiation Factors Gene Family AT5G38640 64.559 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0301 K03680 - gmx:100818977 1189.48