Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0291 ATGCGAATGAGTTGTAACGGATGTCGTGTTTTGCGCAAAGGGTGTAGCGAAGATTGTAGCATAAGACCGTGTTTGCAATGGATCAAGAACCCGGAGTCGCAAGCTAATGCCACTGTGTTTCTTGCTAAGTTCTATGGCCGTGCTGGCCTCATGAACCTCATCAACGCTGGTCCTGAAAACCTTCGTCCTGCTATTTTTCGATCCTTGTTATACGAGGCATGCGGTCGAATTGTTAACCCAATTTACGGGTCAGTGGGTTTGTTATGGTCCGGGAGCTGGCAGCTCTGTCAAGCCGCTGTGGAAGCCGTTTTGAAAGGTGAGCCGATCACGCCGATAACATCCGAAGCCGCGGCTAATGGGCGGGCCCCACCTCTCAAGGCCTACGACATACGCCACGTGTCAAAAGACCAGAACTCGGCAAATGAAACTCCAAAGACCAAGACCCGGTCCCGGTTCAAGCGAACCAGCGGCACGCTTATTAAACCGAAGGCCAGCAAAGGAACCGGGTTCGTTCCGGTTGAGCCGGAGATGGCGAACCGGACTGCGAGTCATGAGTCGGGGCTGAGCCACTTGTCGGAAGCCACGGCGATGGTGGAGGGGGAAAGCAAAGAGAGCGAAAGCGTGGTGTCGATGGATACCTCAAACCTAATTCACGAAGAACCGGAGTGGGTTGCGAAGACGAGTGATGGAACCGGTGAGAGCGGCAACGAAATTGGTTTGGAATTAACGCTCGGGTTCGAACCGGTTTCACGTTTGCATCACGTGGTTCCGATGAAGAAGAGAAAGATAATTGAGTTGAAGAGTTGTGGTGACTCGGCTGAGAAAGACTCGTGTAAGATGGAGCTGGGGCTTGAGTACCCGGCTTGA 867 0.5294 MRMSCNGCRVLRKGCSEDCSIRPCLQWIKNPESQANATVFLAKFYGRAGLMNLINAGPENLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGEPITPITSEAAANGRAPPLKAYDIRHVSKDQNSANETPKTKTRSRFKRTSGTLIKPKASKGTGFVPVEPEMANRTASHESGLSHLSEATAMVEGESKESESVVSMDTSNLIHEEPEWVAKTSDGTGESGNEIGLELTLGFEPVSRLHHVVPMKKRKIIELKSCGDSAEKDSCKMELGLEYPA* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0291 288 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 285 - -
Gso13g0291 288 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Gso13g0291 288 MobiDBLite consensus disorder prediction 133 154 - -
Gso13g0291 288 PIRSF AS2 1 286 IPR017414 -
Gso13g0291 288 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Gso13g0291 288 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0291 Gso-Chr13 14043599 14045618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0291 1 284 AS2 family AT3G02550 61.034 4.78e-112 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso13g0291 LOB 1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0291 - - gmx:100814175 576.63