Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0286 ATGTACACCTCGAGGAAGAAAATTCACAAGGATAAGGATGCCGAGCCCACTGAATTTGAGGAGACAGTTGCACAGTACTTGTTTGACTTGGAGAACACCAATCAGGATCTGAAAAGTGACTTGAAAGATCTCTACATAAATCAAGCAATTCAAATGGATGTGGCTGGTAATCGCAAGGCTGTAGTCATCTATGTGCCCTTCAGATTGAGGAAGGCATTCCGCAAGATTCATCTTCGACTTGTCAGAGAGTTGGAGAAGAAGTTTAGTGGGAAGGATGTTGTCTTCATTGCCACAAGGAGGATCGTGCGACCACCTAAGAAAGGCTCTGCTGTTCAGCGACCCCGAACCCGTACTTTGACCGCCGTCCATGATGCCATGCTGGAGGATGTTGTGTATCCTGCAGAGATTGTTGGCAAACGGGTCAGATATAGAATTGATGGCTCAAAAATAATGAAGGTTTTCTTGGACCCCAAGGAGCGCAACAACACTGAGTACAAGCTGGAGACTTTTTCTGGAGTTTATAGAAAGCTTACTGGAAAAGATGTAGTATTTGAGTATCCAATCTCAGAAGCCTGA 576 0.4479 MYTSRKKIHKDKDAEPTEFEETVAQYLFDLENTNQDLKSDLKDLYINQAIQMDVAGNRKAVVIYVPFRLRKAFRKIHLRLVRELEKKFSGKDVVFIATRRIVRPPKKGSAVQRPRTRTLTAVHDAMLEDVVYPAEIVGKRVRYRIDGSKIMKVFLDPKERNNTEYKLETFSGVYRKLTGKDVVFEYPISEA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0286 191 Coils Coil 27 47 - -
Gso13g0286 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Gso13g0286 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Gso13g0286 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
Gso13g0286 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0286 Gso-Chr13 13981179 13983567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0286 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 82.723 4.25e-119 333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0286 13 13981179 13983567 Gso19g0434 19 7921690 7924148 GST