Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0271 ATGGCACACCAGAATGCAATCCTAACTGTTGAAAACAAAGATGTTACATTCATCAAACCTTCAAAGCCCACTCCTACCACCATTCTTTCACTGTCTAGCATTGACAATGCTCCCGATAACGATTTCTTCATGCAAAGCCTTCATGTATACCGATGGGAAAATCACAATTCCCCTAATACTCCAAAACTTGGCCCTGCAAAATTGATCAAAGTGGCACTCTCGGAGGCTCTCTTTTACTATTATCCTCTTGCAGGAAAGTTAGTAAGACACGCTGATGGAAAATTCAGAATCAACTGCAACTCCGAAGGAGTTCCATTCATAGAGGCTATTTGTAACTGCAGCCTCTCATCTATTCATTACCTAGATTGCAACGACGTCGAAATCGGAAAACATTTTGCTATCGATTTTCCTTCGGAAGATGAATTTGGAAACCAATACCCTTTGGTTTTCAAGGTGACTAAATTCCTCTGTGGGGGTTTCACATTAGTGATGGGCTTGTCCCACGCTATTTTAGACGGAACTGGGCAATCTCAGTTCTTACGCGCAGTTGCTGAACTTGCAAGTGGAAAAGCTGAGCCCTCTGTGAAGCCCGTGTGGGAAAGAGAAAGACTAGTGGGAACATATACTAGTCAACCAATGCAAAATCCCATGGACAATGCTTCTTTTGCAGTTTCACCATTTCTACCAACCACAGATTATTCGCATGAATGCTCGAAGGTGGACAGTGAGAGCATAACAAGACTCAAGACGAGTTTGATGAAAGAAAGTGACAACAAAGAAAGTATGAAGAAAAAAGGGTTCACAACTTTTGAAACCCTAGCTGCGTACATCTGGAGGTCAAGAACCAGAGCCATGAAACTGAGTTACGATAGAAAAACATTGCTGGTAATGACAGTAGGGTTGAGACCACACTTGCTGAATCCTTTGCCTGATGGATATTACGGAAACACCATCATGGATGCATTTGTTACGTTAACAGTGAGGGAGCTGAACGAACTACCACTATTGGAAGTTGTGAAACTCATCAGAGAGAGCAAAGAAGTTGCTTTTAGCGATGACTATATCAGACACTCAATCGACAGTATGCATACGAAGCCAATGGAATATTATTATGAAAGAGGTGGAATAACGTTTATAACGGATTGGAGACATTTGGGTTTGTTGGAAAAGGTTGATTTTGGGTGGAAGGAGCCAGTGAATACTATGCCAGTCCCTTCGGACATGTATGGATTAATAGGTTTGTGCAATATCTTTCTTCCAAGTAATTTGGATCCTTCAATGATTGGAGGAGCTAGGGTTTACGCCTCCCTGCCTAGTGCTGCCATGCCCAAGTTCAAGGAAGAGATGAAAGCTCTTACCAGTGTCCATAAGAGAAATTCGAAAATTTAA 1389 0.4197 MAHQNAILTVENKDVTFIKPSKPTPTTILSLSSIDNAPDNDFFMQSLHVYRWENHNSPNTPKLGPAKLIKVALSEALFYYYPLAGKLVRHADGKFRINCNSEGVPFIEAICNCSLSSIHYLDCNDVEIGKHFAIDFPSEDEFGNQYPLVFKVTKFLCGGFTLVMGLSHAILDGTGQSQFLRAVAELASGKAEPSVKPVWERERLVGTYTSQPMQNPMDNASFAVSPFLPTTDYSHECSKVDSESITRLKTSLMKESDNKESMKKKGFTTFETLAAYIWRSRTRAMKLSYDRKTLLVMTVGLRPHLLNPLPDGYYGNTIMDAFVTLTVRELNELPLLEVVKLIRESKEVAFSDDYIRHSIDSMHTKPMEYYYERGGITFITDWRHLGLLEKVDFGWKEPVNTMPVPSDMYGLIGLCNIFLPSNLDPSMIGGARVYASLPSAAMPKFKEEMKALTSVHKRNSKI* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0271 462 Gene3D - 229 449 IPR023213 -
Gso13g0271 462 PANTHER ACYL TRANSFERASE 4 6 453 - -
Gso13g0271 462 Pfam Transferase family 9 451 - -
Gso13g0271 462 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 453 - -
Gso13g0271 462 Gene3D - 6 222 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0271 Gso-Chr13 13752425 13753813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0271 8 447 Monolignol Biosynthesis Gene Families AT5G48930 27.533 1.72e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0271 K20240 - gmx:100783730 941.028