Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0261 ATGACTACCTTTCCTTCTGCACAACCTGAGGTTTTGCAAACTAACCCACAAGTTTTGACCACATTTGAAGGTGATGCCATCAAGTTAACAGAAATCAATGGAAGTGTTCAAAGAGAGAAGGACATAACAGTGACATGGGAGAATTTGTGGGTCACTGTTTCAAGTGGGAAGAAAAAAAAGCCAATTCTGCAGGATCTTACAGGTTATGCTCGGCCAGGAAGGATTCTGGCCATAATGGGCCCTTCAGGATGTGGAAAATCTACACTTCTTGATGCTTTAGCAGGAAGATTGAGCACAAACATAAAGCATACAGGGAAGATTCTAATCAATGGCCAGAAACAAGCACTGGCCTATGGAACATCAGGCTATGTAACACAAGATGATGCCATGCTATCAACTTTAACCACTGGGGAAACTTTATACTACTCAGCTCAGCTCCAATTTCCAGATTCCATGTCCATAGCAGAGAAGAAGGAACGAGCAGATATGACACTGAGAGAAATGGGTCTGCAAGATGCCATCAACACAAGGGTTGGAGGGTGGGGTTCTAAAGGCCTCAGTGGGGGACAAAAGAGGAGACTTAGCATTTGCATTGAGATTCTAACACGCCCGAGACTTCTCTTCCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCCTATTATGTTATGAGTAGAATTGCAAGTCTAAATCTAAGGGACGGAATTCGAAGGACTATTGTTGCATCCATCCATCAGCCTAGCAGTGAAATTTTTGAACTTTTCCATGACCTATGTCTTCTGTCTTCTGGTGAAACAGTATATTTTGGTCCAGCCTCTGATGCAAATCAGTTTTTTGCTTCAAATGGTTTCCCTTGCCCGACTCTCCACAATCCTTCTGATCACTACCTAAGGATCATAAACAAAGATTTTGAACAGGATGCTGAACAAGGCTTTGGAAAGGGAGTAATTTCAGAAAAAGCAATTGATAACCTTGTAAAGTCTTACAAGTCGTCTCAAATTAGAAAACAAGTTAAAAAGGAAGTGAATAAAATAGGTGAAAGTGATTCTGATGCAATAAGGAAGCAGAGGATTCATGCTGCATTTCCCACTCAATGCCTTGTTCTTATAAGAAGAGCTTCCTTGCAGCTGTTTCGTGACATAAGCAATTACTGGTTACGGTTAATTGTCTTTATTGTAATAGCTATAAGCATTGGCTCTATCTTCTATGACATAGGCACAAGTAATGGATCTATTCAGGGGAGAGGTTCGCTGTTCATATTTTTTGTTTCAGTTCTGACTTTCATGACCCTTGTTGGTGGATTTTCTCCACTTTTGGAAGAAATCAAGGTATTTGAACGAGAGAGATTGAATGGGCACTATGGTGTCACGGCATTTCTCATAGGCAACATATTCTCTGCTGTTCCTTACATGCTATTGATATCTCTTATTCCTGGAGGAATAGCATACTACCTTTGTGGAATGCACAAAGGACCAGAACGCTTCTTCTACTTCACTTCTTTGTTATTTGCCATAGTGATGTGGGTTGAGAGCCTTATGTTGGTTGTTGGGAGTATCTGCCCCAACTATGTAATAGGTATGTTCCTTGCTGGTGGAGTTGAAGGGCTCATGATTTTAACTGGTGGATTCTATAGACTGCCAAATGATCTTCCCAAACCACTATGGAAGTACCCTTTATACTATGTTTCCTTCCTCAAATATGCCTTCCAAGGATCCTTCAAGAATGACTTTGAAGGCTTAACATTTTCTGTAGACCAAGATGGAGGAGTCACCAGAACCGTGAGTGGTAGAGAAGTACTAAGTGACACATGGCATCTGGAAATGGGTTACTCTAAGTGGGTTGATCTTGCTATCATGTTTGGAATGATTCTTCTGTATCGAGTTTTGTTCTTGGTCATCACTAAGTGCAAGGAGAAGCTGAAGCCTTTTCACTAG 1938 0.4118 MTTFPSAQPEVLQTNPQVLTTFEGDAIKLTEINGSVQREKDITVTWENLWVTVSSGKKKKPILQDLTGYARPGRILAIMGPSGCGKSTLLDALAGRLSTNIKHTGKILINGQKQALAYGTSGYVTQDDAMLSTLTTGETLYYSAQLQFPDSMSIAEKKERADMTLREMGLQDAINTRVGGWGSKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIASLNLRDGIRRTIVASIHQPSSEIFELFHDLCLLSSGETVYFGPASDANQFFASNGFPCPTLHNPSDHYLRIINKDFEQDAEQGFGKGVISEKAIDNLVKSYKSSQIRKQVKKEVNKIGESDSDAIRKQRIHAAFPTQCLVLIRRASLQLFRDISNYWLRLIVFIVIAISIGSIFYDIGTSNGSIQGRGSLFIFFVSVLTFMTLVGGFSPLLEEIKVFERERLNGHYGVTAFLIGNIFSAVPYMLLISLIPGGIAYYLCGMHKGPERFFYFTSLLFAIVMWVESLMLVVGSICPNYVIGMFLAGGVEGLMILTGGFYRLPNDLPKPLWKYPLYYVSFLKYAFQGSFKNDFEGLTFSVDQDGGVTRTVSGREVLSDTWHLEMGYSKWVDLAIMFGMILLYRVLFLVITKCKEKLKPFH* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0261 645 Gene3D - 42 370 IPR027417 -
Gso13g0261 645 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 19 645 - -
Gso13g0261 645 Pfam ABC-2 type transporter 365 576 IPR013525 GO:0016020|GO:0140359
Gso13g0261 645 Pfam ABC transporter 63 214 IPR003439 GO:0005524
Gso13g0261 645 ProSitePatterns ABC transporters family signature. 186 200 IPR017871 GO:0005524
Gso13g0261 645 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 19 645 - -
Gso13g0261 645 SMART AAA_5 72 265 IPR003593 -
Gso13g0261 645 Pfam ABC-2 type transporter 246 311 IPR043926 GO:0140359
Gso13g0261 645 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 44 289 IPR003439 GO:0005524
Gso13g0261 645 CDD ABCG_EPDR 42 271 - -
Gso13g0261 645 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 280 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0261 Gso-Chr13 13589740 13594559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0261 62 224 Calmodulin-binding Proteins AT2G36910 32.353 3.02e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0261 K05681 - gmx:100790102 1281.54