Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0239 ATGGCACTGGAAGTGCTTGAAGCGCTCGATTCAGCGCGCACGCAATGGTACCACGTGACGGCCATTGTTATAGCGGGCATGGGCTTCTTCACTGATGCCTATGACCTTTTCTGTATCTCAACGGTTTCGAAACTTTTGGGACGGTTGTACTATTTTGACCCGAGCACCCCAACGGTGCCTGGAAAGCTCCCGCTGAACGTGAACAACATGGTCACCGGTGTCGCACTCGTTGGGACCCTCAGTGGCCAGCTCGTCTTTGGCTGGCTCGGAGACAAGCTCGGCCGGAAAAAAGTTTACGGTATCACCCTGATCCTCATGGTGTTCTGCGCCATTTGCTCTGGACTATCGTTCGGGGCAACAGCGAAGTCTGTCATGGGGACGCTCTGCTTCTTCCGCTTCTGGCTCGGCTTCGGCATCGGCGGAGACTACCCGCTCTCCGCCACCATCATGTCGGAGTACGCCAACAAGCGGACACGCGGCGCATTTATAGCAGCCGTGTTCGCCATGCAAGGTGTGGGGATCATTTTCGCGGGTTTAGTCTCCATGGCCCTCTCAGGAATCTTTAAATACTACTACCCTGCCCCAGCGTACATCGATAATCCTGTCTTGTCCACACAACCCGAGGGTGACCTTTTGTGGCGGCTTGTTCTCATGATTGGATCTGTCCCTGCGATGTTGACTTACTATTGGCGAATGAAAATGCCGGAGACGGGGCGTTACACCGCCATCATCGAAGGAAACGTGAAGCAAGCCGCCGCCGACATGGCGAAAGTCTTGGACATAGAGATCCAGGCTGAGCAAGATAAGTTGGCGGAATTCAATGCTAACAATAACTACCCACTCTGGTCAAACGAGTTCTTCAAGCGACATGGACGCCACTTGATAGGAACAATGAGTTCATGGTTTTTGTTAGATATTGCGTTCTACAGCCAAAACTTAACGCAGAAGGATATTTTCCCTGCGGTTGGGCTCATACACAAAGACTTTGAAATGGACGCTATTAGGGAAGTGTTCGAGACGTCACGTGCCATGTTCGTGATCGCGTTGCTGGGAACATTCCCAGGGTATTGGTTCACTGTTTTCTTCATTGAGAAGATTGGAAGGTACAAGATCCAACTTATTGGGTTCTTCATGATGTCGTTCTTCATGTTCATCATTGGGGTGAAGTACGATTATCTCAAGAACGAGGGCAAAGGCTACTTTGCGCTCTTATACGGATTAACGTTCTTTTTTGCTAACTTTGGACCCAATAGCACGACGTTCGTGCTGCCCGCCGAGCTTTTCCCGACGCGCGTGAGAAGCACGTGTCACGCCCTTAGCGCTGCGGCGGGAAAAGCCGGGGCCCTCGTGGGGACATTCGGAATACAAAGTTTGACTGTGGGTGGTCAATCATACAAGATTAAAAAGGTGATGATTATTCTGGCGGTGACAAACTTGTTAGGGTTCTTCTCTTCGTTTTTGGTTACTGAAACGAAGGGACGGTCCTTGGAAGAGATTTCTGGGGAGGATGGGAGAGAGAGTGAACTCACGCCAACGCCCAATAATAGGATTCAGGGTAGGATTCAGGGTTCAAGGACTGAGACAATGTGA 1590 0.5088 MALEVLEALDSARTQWYHVTAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYFDPSTPTVPGKLPLNVNNMVTGVALVGTLSGQLVFGWLGDKLGRKKVYGITLILMVFCAICSGLSFGATAKSVMGTLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGVGIIFAGLVSMALSGIFKYYYPAPAYIDNPVLSTQPEGDLLWRLVLMIGSVPAMLTYYWRMKMPETGRYTAIIEGNVKQAAADMAKVLDIEIQAEQDKLAEFNANNNYPLWSNEFFKRHGRHLIGTMSSWFLLDIAFYSQNLTQKDIFPAVGLIHKDFEMDAIREVFETSRAMFVIALLGTFPGYWFTVFFIEKIGRYKIQLIGFFMMSFFMFIIGVKYDYLKNEGKGYFALLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAAAGKAGALVGTFGIQSLTVGGQSYKIKKVMIILAVTNLLGFFSSFLVTETKGRSLEEISGEDGRESELTPTPNNRIQGRIQGSRTETM* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0239 529 Coils Coil 256 276 - -
Gso13g0239 529 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 493 IPR020846 GO:0022857
Gso13g0239 529 CDD MFS_PhT 22 492 - -
Gso13g0239 529 TIGRFAM 2A0109: phosphate:H+ symporter 6 502 IPR004738 GO:0005315|GO:0006817|GO:0016021
Gso13g0239 529 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-11 2 510 - -
Gso13g0239 529 MobiDBLite consensus disorder prediction 507 529 - -
Gso13g0239 529 Gene3D MFS general substrate transporter like domains 17 516 IPR036259 -
Gso13g0239 529 SUPERFAMILY MFS general substrate transporter 8 500 IPR036259 -
Gso13g0239 529 MobiDBLite consensus disorder prediction 497 529 - -
Gso13g0239 529 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 2 510 - -
Gso13g0239 529 Pfam Sugar (and other) transporter 22 500 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0239 Gso-Chr13 12535969 12537963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0239 3 502 Inorganic Solute Cotransporters AT5G43350 62.305 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0239 K08176 - gmx:100802261 1049.27