Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0214 ATGGTGCCTCCTGGGCCACCCACGCCGATTGGTGGTGCTCAGTCTGTGCCGCTGTCGCTTTTGAGATCAAATTCGGGAATGTTGGCGGGTCAAGGGGGGGGAGCTGTGCCTTCACAAACCTCGTTCCCTTCGCTGGTGGGACAGCGAAACCAGTTTAACAACATGAATATGCTAGGGAACATGTCTAATGTGACTTCCTTGCTGAATCAGTCTTTCCCGAATGGAATTCCAAATTCAGGGCTTGGTGGCCCTGGGAGCAGCCAGCGCAGTGGAGGGATTGATGCTGGGGCAGAGGCGGATCCGCTATCTGGTGTTGGCAATGGAATGAATTTTGGCAATCAGTTGCAATCAAATTTGATGAACCCTGGTTCATCTGGTCAAGGTCAGGGTCCACAATTTTCAAATGCTTCTGGTAGCCAGATGTTGCAAGATCAGCAGCATTCGCAGCAACTTCCTCAGAATTTCCAACAACATAGTCAGCCGTCAATGCAACAGTTCTCTGGTCCTCTGAACGCTCAACAGCAACAGCAGCAGCAGCAGCATTTTCAGTCCATTCGAGGTGGGATGGGTGGTGTTGGGCAGGTGAAGTTGGAGCCACAGGTAAACATCGATCAGTTTGGGCAGCAGCAGCAGTTGCCGTCGAGGAATCTTGCTCAGGTGAAGTTGGAACCGCAGCAACTTCAAACATTGAGAAATATGGCACCGGTGAAAATGGAGCCCCAGCATAATGATCAGCAATTTTTGCACCAGCAACAACAACAGCAGCAGCAGCAGCAACAACAACAACAACAGCAACAACTGCTCCACATGTCAAGGCAATCCTCTCAGGCTGCTGCTGCTCAGATGAATCATCTTTTGCAGCAGCAGAGACTTTTGCAATATCAACAACATCAGCAGCAGCAGCAGCAACTCTTGAAGGCAATGCCTCAACAACGGTCCCAGCTACCACAGCAGTTTCAACAGCAAAATATGCCTATGAGGTCTCCTGTGAAACCAGCATATGAACCCGGGATGTGTGCCAGGCGGTTGACACATTACATGTATCAGCAACAACATAGACCTGATGATAACAATATCGAATTCTGGAGGAAATTTGTTTCTGAGTATTTTGCTCCAAATGCCAAAAAGAAGTGGTGTGTTTCCATGTATGGAAATGGCAGACAAACTACTGGAGTTTTCCCTCAGGATGTATGGCACTGTGAAATATGTAATCGCAAACCTGGGCGTGGGTTTGAAGCAACTGCTGAGGTTCTTCCCAGGCTTTTCAAAATAAAATATGAAAGTGGTACTTTGGAAGAGCTACTTTATGTTGACATGCCTCGGGAATATCATAATTCCTCTGGCCAGATTGTTCTAGATTATGCAAAAGCAATACAAGAAAGCGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCAGACCTAAAGATATGCTCTTGGGAATTTTGTGCTCGGCGCCATGAAGAGCTCATCCCCAGAAGATTGTTAATACCTCAGGTTAGTCAACTTGGAGCAGTTGCTCAAAAATACCAGGCAATAACTCAAAATGCAACACCCAATTTATCCGTTCCAGAGTTACAGAATAATTGCAATATGGTTGTTGCATCAGCCCGTCAGTTGGCAAAAGCTTTAGAAGTTCCATTGGTCAATGATTTAGGATATACAAAGAGATACGTGCGGTGCCTTCAGATATCGGAAGTGGTAAATAGTATGAAAGACTTGATAGATTATAGCAGAGAAACAGGGACTGGACCCATGGATAGCTTAGCTAAATTCCCTCGGAGAACAAGTGGTTCATCTGGACTTCATAGTCAGGGACAACAGTCTGAAGATCAATTACAGCAGCAGTCACAGCCACAACTGCCACCCCAGCATATGGTGCCTCATTCTTCAAACGGTGATCAAAACTCTGTGCAAACTGCTGCTATGCAAATTGCTTCTAGCAATGGTGTGACAAGTGTAAATAATTCCGTCAATGCAGCATCTGCATCAACCTCCACAAGCACCATTGTTGGACTTCTTCACCAGAATTCCATGAATTCTAGACAAAATTCCATGAATTCTAGACAAAATTCCATGAACAATGCAAGCAGCCCTTATGGAGGTAGTTCTGTTCAAATTGCATCCCCGGGTTCCTCTGGTAACATGCCACAAGCACAGCCAAATGCATCTCCTTTTCAATCACCAACACCATCCTCATCTAACATCCCACAAACATCTCACCCTGTCTTAACTTCAGCAAACCACATGGGTACAGCAAACTCACCAGCTAATATTTCCTTGCAACAACAACAACAAACATCTCTTCCTGCTGAAGCTGACCCTAGCGATGCCCAGAGCTCGGTCCAGAAAATCATTCATGAGATGATGATGTCCTCCCAGATGAATGGCCCTGGTGGAATGGCTGGTGCTGGTTCGCTTGGAAATGACATGAAGAATGTAAACGGGATTCTACCAGGGAGTAACAATACAGGGCTCAACAGTGGCAGTGTCAGTGGCCTGGTGGGTAATGTGGCTGTGAACAGTAATTCAGGTGTTGGGGTTGGTGGTTATGGCACAATTGGTCTTGGTCCAGCTGGTATGACTAATGGAATGAGACCTGTAATGGGACATAATTCAATCATGAATGGAAGGGGAGGAATGGCATCTCTTGCGCGTGATCAAGTTATGAATCATCAGCAGGATCTGTCAAGCCAACTACTTAGTGGGCTAGGAGGAGTAAATGGCTTCAGTAATCTTCAATTTGATTGGAAACCGTCTCCATGA 2787 0.46 MVPPGPPTPIGGAQSVPLSLLRSNSGMLAGQGGGAVPSQTSFPSLVGQRNQFNNMNMLGNMSNVTSLLNQSFPNGIPNSGLGGPGSSQRSGGIDAGAEADPLSGVGNGMNFGNQLQSNLMNPGSSGQGQGPQFSNASGSQMLQDQQHSQQLPQNFQQHSQPSMQQFSGPLNAQQQQQQQQHFQSIRGGMGGVGQVKLEPQVNIDQFGQQQQLPSRNLAQVKLEPQQLQTLRNMAPVKMEPQHNDQQFLHQQQQQQQQQQQQQQQQQLLHMSRQSSQAAAAQMNHLLQQQRLLQYQQHQQQQQQLLKAMPQQRSQLPQQFQQQNMPMRSPVKPAYEPGMCARRLTHYMYQQQHRPDDNNIEFWRKFVSEYFAPNAKKKWCVSMYGNGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQAITQNATPNLSVPELQNNCNMVVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMDSLAKFPRRTSGSSGLHSQGQQSEDQLQQQSQPQLPPQHMVPHSSNGDQNSVQTAAMQIASSNGVTSVNNSVNAASASTSTSTIVGLLHQNSMNSRQNSMNSRQNSMNNASSPYGGSSVQIASPGSSGNMPQAQPNASPFQSPTPSSSNIPQTSHPVLTSANHMGTANSPANISLQQQQQTSLPAEADPSDAQSSVQKIIHEMMMSSQMNGPGGMAGAGSLGNDMKNVNGILPGSNNTGLNSGSVSGLVGNVAVNSNSGVGVGGYGTIGLGPAGMTNGMRPVMGHNSIMNGRGGMASLARDQVMNHQQDLSSQLLSGLGGVNGFSNLQFDWKPSP* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0214 928 MobiDBLite consensus disorder prediction 243 280 - -
Gso13g0214 928 MobiDBLite consensus disorder prediction 107 185 - -
Gso13g0214 928 MobiDBLite consensus disorder prediction 688 788 - -
Gso13g0214 928 Pfam LIM-domain binding protein 342 596 IPR029005 -
Gso13g0214 928 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 927 - -
Gso13g0214 928 PANTHER LIM DOMAIN-BINDING PROTEIN 1 927 IPR029005 -
Gso13g0214 928 MobiDBLite consensus disorder prediction 586 643 - -
Gso13g0214 928 MobiDBLite consensus disorder prediction 241 280 - -
Gso13g0214 928 MobiDBLite consensus disorder prediction 303 328 - -
Gso13g0214 928 MobiDBLite consensus disorder prediction 600 643 - -
Gso13g0214 928 MobiDBLite consensus disorder prediction 75 193 - -
Gso13g0214 928 MobiDBLite consensus disorder prediction 303 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0214 Gso-Chr13 11687241 11699792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0214 1 924 C2H2 Transcription Factor Family AT1G43850 58.412 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0214 - - gmx:100787437 1549.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1282 14 34362217 34374265 Gso13g0214 13 11687241 11699792 GST