Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0211 ATGTTCCAAGTAGTAGCCGCAGAGAGAATGGGTTCCTCGGAAGCCGAAAACGAGGCTCTCCGTGGCGCCGAAGAAGAAGAGGGTTCTACTTCTAACAAGAAATGCGGCAAGTTCTACGATGTTTATGGACCCGAAGGCAAGGCAGACATTGTTTTTAACTCACCAGAAGATAATTCAACTCTCAATCTTAGTGATGTTCAAGGACTTGTAACTTGGGTGCTCAGTGAAGGATTTATGCCGTCATGGGTTTTTATTAAGAATAAACCTCTTATTCCCAAAGTGGTTATGCTCTATGTGCCAGGCCTGGATGCAGCTTTGTTCTTGTCACAGTCTAAAATGCTTCCAAGATTAAAAAAATTCTGTGGCAAACCAAGGGCACTCCTAGCTCTTAGCTGTGTGTCAGATGGTATGCAGACGATAGATGCACTCCTAACATGCAAGATGAAAAGGAAAAGGGACGAGAATAGTTCAATTATGGGGAAATTTGCTCGGACATCTCAACAAGAAGAAGGTTGTTGTGATACAGACAGTCTATCATTTAAGGAGCTTACAAAAGACATACCTTTCCCTGTTACATACTATACACTAACAGAGAAAGAGTTGGAAGAGAATGGATATTCTGTTAATAAGCCAGGTTTTCTTTCTACTTTGCCCGCTCCTTCAGGATCTCCTTTTTATGAGATGTTGGCACTTGATTGTGAGATGTGCATAACAAGTGAAGGTTTTGAGCTGACAAGAATTACTCTAGTAGATGTCAAAGGACAGGTTTTGATAGATAAATTGGTTAAACCATCAAATGCCATCACTGATTACAACACAAGATTTAGTGGAATAACGTCTGAGATGTTAGATGGCGTGACAACAAGTCTGAGAGACATTCAGGAAGAGTTCATAAAGTTGGTTTACAAGGAGACTATCCTTGTTGGGCATTCTCTGGAAAACGATTTGTTAGCATTGAATATATCTCATGACTCGGTCATTGACACAGCAGTATTATACAAACACCCCCGAGGATCGTCTCATAAAAATGCTCTACGGTTTCTTACTAAGAGATTTCTTTCAAGGGAAATCCAACAGTCAGGGAATGGACATGACAGCATTGAAGATGCTAGAGCTACCATGGAATTGGCACTATTGAAGATCAGAAATGGGCCTGATTTTGGTTCCCCTCCATCCTTTACAAGGAAAAAGCTCCTTTCTATTCTGAGTGAGTCTGGCAAAATTTCCTCACTGATTGATGATATATCCGTAGTAAAACGGTATGCCTCAGAGTCCTCTCATGCAATTCCAGTGACCTCTGATGATGTAGCACTTGCAAAGGCCAACAAGGAGGTGAAGAATGAAAAGGTACATTTTATCTGGACTCAGTTTTCAGAGCTACACTCGTACTTGAAGAAACAAGCTGAAGATTCTGAGAGCTTGAATAAAAGACTTGCAGAGATGATTGCAATAAAAACATGTCAAAATAATTTTGCAAAAGGGAAAGGCTTCAAGTTAAATGCATCTGCTGAACTGAAGGAAATTCTGGCTCGCATGGACGCTAGAATTCATAATCTGTATTTGTCATTACCCACAAATGCTATGATGATAATTTGCACTGGTCATGGAGACACTGCTATTGTCCGCAGGCTGAGGAAAATGCTTACGGAGCAGAATGAAAGCAATTTATGTCGGGAAGAGATTGTGGAAATATTGGAAGAGGTTCAGGCCCGAGCTGAAGTAGCCTTGTGTTTTGTAGGTGTAAAACATTGA 1752 0.4081 MFQVVAAERMGSSEAENEALRGAEEEEGSTSNKKCGKFYDVYGPEGKADIVFNSPEDNSTLNLSDVQGLVTWVLSEGFMPSWVFIKNKPLIPKVVMLYVPGLDAALFLSQSKMLPRLKKFCGKPRALLALSCVSDGMQTIDALLTCKMKRKRDENSSIMGKFARTSQQEEGCCDTDSLSFKELTKDIPFPVTYYTLTEKELEENGYSVNKPGFLSTLPAPSGSPFYEMLALDCEMCITSEGFELTRITLVDVKGQVLIDKLVKPSNAITDYNTRFSGITSEMLDGVTTSLRDIQEEFIKLVYKETILVGHSLENDLLALNISHDSVIDTAVLYKHPRGSSHKNALRFLTKRFLSREIQQSGNGHDSIEDARATMELALLKIRNGPDFGSPPSFTRKKLLSILSESGKISSLIDDISVVKRYASESSHAIPVTSDDVALAKANKEVKNEKVHFIWTQFSELHSYLKKQAEDSESLNKRLAEMIAIKTCQNNFAKGKGFKLNASAELKEILARMDARIHNLYLSLPTNAMMIICTGHGDTAIVRRLRKMLTEQNESNLCREEIVEILEEVQARAEVALCFVGVKH* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0211 583 Gene3D - 226 386 IPR036397 GO:0003676
Gso13g0211 583 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 19 568 - -
Gso13g0211 583 Pfam Exonuclease 230 376 IPR013520 -
Gso13g0211 583 CDD REX1_like 229 378 IPR034922 -
Gso13g0211 583 SMART exoiiiendus 227 386 IPR013520 -
Gso13g0211 583 MobiDBLite consensus disorder prediction 14 31 - -
Gso13g0211 583 SUPERFAMILY Ribonuclease H-like 228 381 IPR012337 -
Gso13g0211 583 PANTHER LD29573P 19 568 - -
Gso13g0211 583 MobiDBLite consensus disorder prediction 6 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0211 Gso-Chr13 11606422 11617546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0211 221 376 C2H2 Transcription Factor Family AT3G27970 29.944 2.17e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0211 K14570 - gmx:100802793 1129.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1280 14 34223653 34253106 Gso13g0211 13 11606422 11617546 GST