Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0210 ATGTCATTGGTTATATCTACAGAGTTGGCTGATACATCATATGGGAATGCCAAGCTCTACACACTAAAGGGAACTGATGTTACACCAGATTTGTCCTCCCACAATTTTGCACCAGATAAGCACAGAAACATGTACATGACAAAGTCATACTCCTGTGAGAGTTATGAAAAGTACTTCCACGATTCACCAACAGAAGAGCTGATAGAACCATCAAGTTCCAGCATATCAGGAAACTCAGTTCACCCTGATGGTGCTTCTTCTTACCTGCTCAGAGCTAGTTCAGGAGCTTCTGTGATTGTTAATAACCCATTTGACACTTCTATCTGGTCTACAAGGCATCGCGATGCCTATCAGTCCAATTCTGTATCAGATTTCGTGGAAAATGGGAGCCCGGATGGCCTTGACTTCGATGGTGAAATGAGACTAAAACTTCAAGAATTGGAGAGGGCTTTGCTTTCTGATGAAGAAGAGGAGGAGCAAGGCATATTTGAGACTGTTCAAAGCATGGAGATTGATCCTGACATGGTCGAGTGGGCCAATCCGCTTCAAGATATGCTGCTCCATGACTCACCAAAGGAGTCCTCATCCTCAGATTCTTCCAATCTTAGCAGCATCAGTAGCACCACCAAAGACACATCACAAAACTCACCCCAAACCCCTAAGCAACTGCTTTATGATTGTGCTAGGATACTTTCAGAAGGAAATGAACAGGAAGCCACATCTATGATAAACAAGCTCCGGCAAATGGTCTCAATTCAGGGTGATCCTTCTCAGAGAATTGCAGCTTACATGGTGGAAGGACTTGCAGCTCGTGTCGCTACATCCGGAAAATGCATCTATCAAGCATTGAGATGCAAGGAACCTCCTTCTAACGATCGCTTAGCAGCAATGCAAATACTATTTGAGGTCTGCCCGTGTTTTAAATTTGGATACATCGCGGCAAATGGTGCAATAGCTGAGGCTGTTAGAGATGAAAAGAAGGTTCACATAATAGACTTTGACATCAGCCAAGGAACTCAATACATAACTCTAATACAAACACTTGCTTCAATGCCAGGTAGGCCACCTCATGTGAGATTAACCGGGGTGGATGATCCTGAGTCTGTGCAGCGTTCCATTGGTGGCATAAACATCATAGGACAAAGACTTGAAAAGCTGGCAGAGGAACTTGGATTGCCATTTGAGTTTCGAGCAGTGGCGTCAGGGACCTCAAATGTCACACAATCAATGCTTGACTGTCGTCCGGGGGAAGCACTTGTGGTGAACTTTGCATTCCAGCTTCACCACATGCGCGATGAAACTGTATCGACAGTGAACGAGCGAGACCAACTTCTTCGCATGGTTAAGAGCTTGAATCCAAAACTTGTGACAGTTGTGGAGCAGGACATGAACACCAACACCTCCCCTTTTCTCCCAAGATTTGTTGAAGCCTACAATTACTACTCTGCTGTGTTTAACACACTTGATGCAACTCTCCCTAGGGAGAGCCAGGACAGGATGAATGTCGAAAGGCAATGCCTGGCAAAGGACATAGTCAACATTGTTGCTTGCGAGGGTGAGGAAAGAATAGAACGGTATGAAGTCGCCGGAAAATGGAGGGCAAGGTTGTCAATGGCTGGCTTCACTCCATCCCCAATGAGCACAAATGTGAGAGAAGCAATTAGGAAACTCATTATTAAGCAATACTGTGACAAATTCAAGATAAAGGAGGAAATGGGGGGTCTTCATTTTGGGTGGGAAGACAAAAACTTAATTGTTGCTTCAGCATGGAAGTGA 1776 0.4476 MSLVISTELADTSYGNAKLYTLKGTDVTPDLSSHNFAPDKHRNMYMTKSYSCESYEKYFHDSPTEELIEPSSSSISGNSVHPDGASSYLLRASSGASVIVNNPFDTSIWSTRHRDAYQSNSVSDFVENGSPDGLDFDGEMRLKLQELERALLSDEEEEEQGIFETVQSMEIDPDMVEWANPLQDMLLHDSPKESSSSDSSNLSSISSTTKDTSQNSPQTPKQLLYDCARILSEGNEQEATSMINKLRQMVSIQGDPSQRIAAYMVEGLAARVATSGKCIYQALRCKEPPSNDRLAAMQILFEVCPCFKFGYIAANGAIAEAVRDEKKVHIIDFDISQGTQYITLIQTLASMPGRPPHVRLTGVDDPESVQRSIGGINIIGQRLEKLAEELGLPFEFRAVASGTSNVTQSMLDCRPGEALVVNFAFQLHHMRDETVSTVNERDQLLRMVKSLNPKLVTVVEQDMNTNTSPFLPRFVEAYNYYSAVFNTLDATLPRESQDRMNVERQCLAKDIVNIVACEGEERIERYEVAGKWRARLSMAGFTPSPMSTNVREAIRKLIIKQYCDKFKIKEEMGGLHFGWEDKNLIVASAWK* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0210 591 ProSiteProfiles GRAS family profile. 211 591 IPR005202 -
Gso13g0210 591 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 10 590 IPR030011 GO:0003700|GO:0005634
Gso13g0210 591 MobiDBLite consensus disorder prediction 187 219 - -
Gso13g0210 591 MobiDBLite consensus disorder prediction 189 219 - -
Gso13g0210 591 Pfam GRAS domain family 221 591 IPR005202 -
Gso13g0210 591 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 590 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0210 Gso-Chr13 11601733 11605579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0210 1 591 GRAS Transcription Factor Family AT1G21450 61.603 0.0 693
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso13g0210 GRAS 5.6e-134 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0210 - - gmx:100807048 1141.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1279 14 34219035 34222962 Gso13g0210 13 11601733 11605579 GST
Gso13g0210 13 11601733 11605579 Gso4g2026 4 50618091 50621847 PCT
Gso13g0210 13 11601733 11605579 Gso6g1023 6 9965582 9969299 PCT
Gso4g2026 4 50618091 50621847 Gso13g0210 13 11601733 11605579 PCT
Gso6g1023 6 9965582 9969299 Gso13g0210 13 11601733 11605579 PCT