Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0207 ATGGTGAAGGAAACAGAGTACTACGATATCCTCGGAGTCTCTCCCTCTGCCTCCGATGACCAAATTCGCAAGGCCTATTACCACAAGGCAATGCAAGTTCATCCCGATAAAAACCCGAACGATCCTCACGCTGCCGAAAAGTTTCAGATTTTGGGTGAAGCGTACCAAATTTTGAGTGTTCCGGTGCAGAGGAATGCGTATAATCAAAATGGGAAGCATTCTGTATCTAGGGAAACTATGCTTGACCCCATGGCTGTCTTCGCCCTGCTCTTTGGGAGTGAATTGTTTGAGGACTACATAGGGCATCTAGCTGTGGCATCAATGGCTTCCTCTGAGCTAGCTGATGAAACTGAGGATCCTGATAAACTCAATGAGAAGCTAAAGGCTGTCCAAAAAGAAAGAGAAGAAAAGCTAGCAAGAATTTTGAGGGATTATCTTGGCCAATATGTCCGGGGTAACAAAAAAGGATTCTTCCAACGCGCAGAATCTGAAACAAGGCGGCTTTCTCGTGCTGCATTTGGAGTTGATATGTTACATACCATCGGCTACATATATTCAAGACAGGCAGCACAAGAACTAGGTAAAAAAGCCATTTATCTTGGAGTGCCATTTCTGGCTGAATGGGTACGAAACAAAGGGCATTTCTGGAAATCACAATTCACAGCTGCTAAAGGTGCTTATCAGTTACTTCAGCTCCAAGACGACATGCGCAAGCAATTTAAAATGGATGGTAGTAGTGTGCCTGAAAATGATGTTGACTCTCACATTCGCCTTAACAAGGATACATTGATGAATTCCTTGTGGAAGTTAAATGTAGTGGACATAGAAGTAACCCTCGTACACGTGTGTCAAATGGTGCTAAGGGAAAATAACGTTAAGAAGGAGGAACTTAGACTTCGGGCTACTGCTCTTAAAATTCTTGGGAAGATATTTCAGGACAAGTATCCAAAAGGAGAAACATTGAAGAAGAAGATTGCTGCTGATTCTGATGATGAAGAAAGCAGTTCTGAATCTTCAGATGATGAATCCTCTAGAGCAATTTCCTACCGAACTCCCTTTTTTACGCAGGGTCTCGGAAGGCTCTTCAAATGCCTTTGTAGTCCAGCATTTGATGTGGATGATGAAGAGATAGTTTACAAAAGCAAATGA 1149 0.4273 MVKETEYYDILGVSPSASDDQIRKAYYHKAMQVHPDKNPNDPHAAEKFQILGEAYQILSVPVQRNAYNQNGKHSVSRETMLDPMAVFALLFGSELFEDYIGHLAVASMASSELADETEDPDKLNEKLKAVQKEREEKLARILRDYLGQYVRGNKKGFFQRAESETRRLSRAAFGVDMLHTIGYIYSRQAAQELGKKAIYLGVPFLAEWVRNKGHFWKSQFTAAKGAYQLLQLQDDMRKQFKMDGSSVPENDVDSHIRLNKDTLMNSLWKLNVVDIEVTLVHVCQMVLRENNVKKEELRLRATALKILGKIFQDKYPKGETLKKKIAADSDDEESSSESSDDESSRAISYRTPFFTQGLGRLFKCLCSPAFDVDDEEIVYKSK* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0207 382 CDD DnaJ 6 59 IPR001623 -
Gso13g0207 382 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 366 - -
Gso13g0207 382 PRINTS DnaJ domain signature 8 26 IPR001623 -
Gso13g0207 382 PRINTS DnaJ domain signature 26 41 IPR001623 -
Gso13g0207 382 PRINTS DnaJ domain signature 43 63 IPR001623 -
Gso13g0207 382 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Gso13g0207 382 Pfam X-domain of DnaJ-containing 131 315 IPR026894 -
Gso13g0207 382 MobiDBLite consensus disorder prediction 322 345 - -
Gso13g0207 382 SUPERFAMILY Chaperone J-domain 2 101 IPR036869 -
Gso13g0207 382 Gene3D DnaJ domain 1 85 IPR036869 -
Gso13g0207 382 SMART dnaj_3 5 63 IPR001623 -
Gso13g0207 382 Pfam DnaJ domain 6 68 IPR001623 -
Gso13g0207 382 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0207 Gso-Chr13 11435651 11441574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0207 7 68 C2H2 Transcription Factor Family AT1G74250 38.806 1.42e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0207 - - gmx:100780838 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1267 14 33466180 33472174 Gso13g0207 13 11435651 11441574 GST