Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0204 ATGAGCATGGGAATTCCTCTCCCGTCTTACGTTGTAGTTGCATGTGATGCCACGAGAGCTCGCAATGAGCATGAGGTCAAGCTTGTGGTTGATCATCTTAGAAGCAGGGGTGACATTCTCTCTGAAAGTGATAGCTTGCTAGTGTTCTGTGCCTTGCACAAGGTTGCTCACCCTATGGGGTACCAGACATTAGCATGCCCGGAGTCCTTCGCTGGCACCAATATTCGTGCAATGGAGGAGGAAGTTAACAGAAAAGCTGCAGCATATAAAAGTGTGCTTCTGCCGACTTATGAAGAACGTGAAAATAAAGGGGTAAAAATGGAGGTTAAAGTCACTGCAGGTTTTCCAATTAGACAGGTTATTTTACAACAGGTTACAAACTATAATGCATCTTGGGTTATCCTTGATAGGCATCTTCGGCAGGACATGAGATTCTACAGGAACAAGATATCATGTAAAATTGCACTGGTTAAAGATGACTTGTCGGTGGATATTTGGAGATCACATCATATACATGAAACAGATGTAACAGAACAAAAGCTTATCTATTCTTTGTCCAAGTGTGTTTCACTATCAGATTCTCATAGTATTGGAGATGAGGAGCAATCTGTTATCTTTTGCAAAAGCTATCCTCTTTCCATTGCTTCTGACACCTCTAATATGTCTAAGAGCAGTATGAAACATTCAAATGCTAACAAGTTAGGGGAGCATATTTCTTCAATAGATTTTGGATCTTCTTCAGGCAGAAGCATTCAAGTAGAATATAAGCATCCCATTAATTCTCAAATTTTGCAAAAGCAAAACAGATATGACTTCTTACCAAATTCTTCAGAGACTCCAATTCTTTGTGCTGGTTGCGGGACACAAACTGCATTATACACCAATGAGTTAAAGAGGTTCAGCTATTCTGAGATACAACTTGCAACAAATGATTTTTCAAAGGATAACTTATTAGGTGAAGGTGGATATGGTCACGTTTACAAGGGCATGCTTAAAGATGGACAACAAATTGCTGCTAAAGTAAGGAAAGAAGAAAGTAGACAAGGGTTTTCTGAATTCACTTCTGAGGTTTACGTCTTGAATTTCGCTCGGCACAAGAATATAGTAATGCTTTTGGGTTACTGTTTCAAAGATAGGCTAAACATTTTGGTATATGAGTATATTTGCAACAAGTCTCTTGATTGGCATTTAGTTGATAATAAAAATGCGGCTGTTCTTGAGTGGCATCAAAGATATGTCATTGCCATTGGAACTGCAAAAGGATTGCGTTTTCTACATGAGGAATGTCGTGGAGGTCCTATCATTCATCGTGACATGAGACCAAGCAATATACTCCTCACTCATGATTTTGTTCCCATGCTAGGTGATTTTGGCCTTGCCAAATGGAAGACTAGTGATAATACTCTACACACAAGGATAATGGGCACATTAGGATACCTCGCCCCTGAGTATGCTGAAGATGGTATTGTTTCTGTGGGAGTGGATGTGTATGCTTTTGGCATTATTTTGTTACAATTAATAACTGGACGCAAGCCAACTTCTAGTCCAGAGCAACATCTTTCCCTTCGACAATGGGCTGAGCTCAAGATTGAGAAGTTGGCATTTGATGAACTTATAGATTCTCGTCTAGGGGATTCTTATAACTCAAATGAGTTATACACCATGGCCAAGGTAGCATACTACTGTGTGCAAAGAGATCATCAGAAGCGCCCCTCTATTGGAGAGGTTGTTCGCCTTCTTGAGGGACAAAATGACCTCTTTTGTTCCATTAACGCAGACCAATTCGTATCAAAATATAATATGTGA 1806 0.3987 MSMGIPLPSYVVVACDATRARNEHEVKLVVDHLRSRGDILSESDSLLVFCALHKVAHPMGYQTLACPESFAGTNIRAMEEEVNRKAAAYKSVLLPTYEERENKGVKMEVKVTAGFPIRQVILQQVTNYNASWVILDRHLRQDMRFYRNKISCKIALVKDDLSVDIWRSHHIHETDVTEQKLIYSLSKCVSLSDSHSIGDEEQSVIFCKSYPLSIASDTSNMSKSSMKHSNANKLGEHISSIDFGSSSGRSIQVEYKHPINSQILQKQNRYDFLPNSSETPILCAGCGTQTALYTNELKRFSYSEIQLATNDFSKDNLLGEGGYGHVYKGMLKDGQQIAAKVRKEESRQGFSEFTSEVYVLNFARHKNIVMLLGYCFKDRLNILVYEYICNKSLDWHLVDNKNAAVLEWHQRYVIAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAKWKTSDNTLHTRIMGTLGYLAPEYAEDGIVSVGVDVYAFGIILLQLITGRKPTSSPEQHLSLRQWAELKIEKLAFDELIDSRLGDSYNSNELYTMAKVAYYCVQRDHQKRPSIGEVVRLLEGQNDLFCSINADQFVSKYNM* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0204 601 Gene3D Phosphorylase Kinase; domain 1 286 387 - -
Gso13g0204 601 ProSitePatterns Protein kinases ATP-binding region signature. 318 340 IPR017441 GO:0005524
Gso13g0204 601 Pfam Protein kinase domain 313 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g0204 601 CDD STKc_IRAK 318 582 - -
Gso13g0204 601 SUPERFAMILY Protein kinase-like (PK-like) 293 588 IPR011009 -
Gso13g0204 601 ProSitePatterns Tyrosine protein kinases specific active-site signature. 434 446 IPR008266 GO:0004672|GO:0006468
Gso13g0204 601 PANTHER OS01G0253100 PROTEIN 9 592 IPR045271 GO:0004714|GO:0006468
Gso13g0204 601 ProSiteProfiles Protein kinase domain profile. 312 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g0204 601 PANTHER RECEPTOR-LIKE KINASE 9 592 - -
Gso13g0204 601 Gene3D Transferase(Phosphotransferase) domain 1 389 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0204 Gso-Chr13 11360861 11370977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0204 284 586 Trihelix Transcription Factor Family AT1G70460 44.839 2.50e-77 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Gso13g0204 Pkinase 5.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0204 - - vun:114163670 830.476