Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0184 ATGCAGTTATATCATCATCCGTTGGATTTGGACAGCCAGAGGGTGAGATTTGCATTGGAGGAGGAGGGTGTAGATTATACATCCCACCATGTCAATCCGATAACTGGCAAGAACTTGGATTCCTCTTTCTTCAAGATGAATCGCCATGGAAGGGTTCCGGTTTTCCAAAATGGCTCTCACATCATTTACAATACTATTGATATAATCCAGTACATAGAAAGAATTGCTGTGGTTTCCTCAGGGGTTGAGAGTATCAGTGCCAGTAGCAGGGAAGTGGTTGAATGGATGCAGAAGATACATGACTGGGACCCCAAGTTTTTCACACTTTCACACATACCTGAGAAATACCGCCTTTATGTTTCCAAGTTCATAAGGCAAGTGGCGATTGCTCGCATGTCAGAGTCGCCCGAATTAGCAAGTGATTACCATAGGAAGTTGAAAGAAGCCTATGAGACTGAAGAGAAATTGAAAGAAGCAGATGTTTTGAGAAGGAGCAAGGAGCATTTGGTTATACTGCTTGATGAGGTGGAGAGGCAGCTGAGTGAAACACCTTATTTGGCAGGTCAAGAGTTTACCATGGCAGATGTGATGCTCATTCCAGTATTAGTTCGTTTGAAACTCTTGGATTTAGAGAATGAGTACATAACTGGAAGGCCAAACATTGCTGAGTACTGGATTTTGGTTCAGCAAAGGCCTAGTTACAAAAAGGTGATTGGTAAGTACTTCAATGGTTGGAGAAAGCACAAAACACTTCTAAAAACATGGTTCTTAGTTCGTATTAGAAGTTTTCTGAAAAGGTACTAG 804 0.4179 MQLYHHPLDLDSQRVRFALEEEGVDYTSHHVNPITGKNLDSSFFKMNRHGRVPVFQNGSHIIYNTIDIIQYIERIAVVSSGVESISASSREVVEWMQKIHDWDPKFFTLSHIPEKYRLYVSKFIRQVAIARMSESPELASDYHRKLKEAYETEEKLKEADVLRRSKEHLVILLDEVERQLSETPYLAGQEFTMADVMLIPVLVRLKLLDLENEYITGRPNIAEYWILVQQRPSYKKVIGKYFNGWRKHKTLLKTWFLVRIRSFLKRY* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0184 267 Pfam Glutathione S-transferase, N-terminal domain 1 74 IPR004045 -
Gso13g0184 267 CDD GST_N_family 1 73 - -
Gso13g0184 267 CDD GST_C_family 148 225 - -
Gso13g0184 267 Gene3D - 142 238 - -
Gso13g0184 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 125 251 IPR010987 -
Gso13g0184 267 SUPERFAMILY GST C-terminal domain-like 157 241 IPR036282 -
Gso13g0184 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Gso13g0184 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
Gso13g0184 267 Pfam Glutathione S-transferase, C-terminal domain 162 224 - -
Gso13g0184 267 Gene3D Glutaredoxin 1 96 - -
Gso13g0184 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0184 Gso-Chr13 10657371 10660310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0184 1 267 Glutathione S-transferase Gene Family AT1G77290 68.914 1.41e-140 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0184 K22077 - gmx:100808461 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1225 14 29014554 29017527 Gso13g0184 13 10657371 10660310 GST
Gso13g0184 13 10657371 10660310 Gso6g1000 6 9660966 9663871 PCT
Gso6g1000 6 9660966 9663871 Gso13g0184 13 10657371 10660310 PCT