Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso13g0178 | ATGTGGAGACAGAGCGCTTTATTGGTGTTCGTGTTATTACTAGTCCAGCAAATTTGTGCTACCAGTGAGCAAGAGCATGCTTGCCCCCCTTCTTCCTGTGGCAAAATCACCCACATAACTTATCCATTTCGATTAACAGGCGACCCAAAAGGTTGCGGTGACAAATGGTATGAGCTAGCTTGTGAAAATAATGTTACGGTGTTATATTTGTACTCTGGAAAATATCATGTGCAGGCTATCAACTACAACAATTTCACAATCCGTGTGGTGGATCCGGGTGTTCAACAGCCATATTGCTCCTCCATTCCTCGCTACTTCTTGTCTCAATCAAATTTCAGTGCAATTGATGAAGGGGATCCATACCTAGCCTTTCAAAATCGAGATTATTCTTGGGAGTACGTTTTCCAGCATATAGTTTTCTTAAATTGTAGGCATGCAGTGATTGACAATGAGAAGTATGTGGAAACTGATCCTTGCATCAAGTGGCACTCCAAAGGGTACATATACGCTATTGCTGGTGACTTAATAGCAAAGGACTTTGAAGTTGGTTGTGAGGTAAAGCTGGTTGCTCCCACATCATTGTGGGGTTTGGATACATACACTCAGATGCACAGAGCGCTTATCTATGGATTTGAGCTTTCATGGATGAATCTCGCCTGTGAGGATTATTGTGGAAATCCCTCCTGCACATTTAACTCTTCCAGTCAGATGCTTGAATGCTCCTCCCTCCGCGTCTGCCGCAATTTCGTGGTGGGATGGCAGTACCTTACTCAATGTGAAGCCGGTACTAATGTCTTAAGAGGATTGTTTGAAATTATAAGAGGACCAAACCCAGAACTTGAACATAAATTAGATGCGTATGTCTCACTATTTGTTATCTTTGGACACTACATTCTACCATTCTTGGCAAGCAAGTTTTTGTTTGGGATGACATTGTTTATTGTGCTTTTGATATACAAATGGAGAAAAAGGCATTTGTCAATATATGAAAATATTGAAAATTATCTGGAACAAAATAACCTGATGCCTATTGGATACTCATACAAAGAAATTAAGAAGATGGCTAGAGGTTTCAAGGAGAAATTGGGTGGAGGAGGCTATGGCTTTGTATTCAAGGGAAAGTTGCGTAGTGGGCCTTCTGTGGCAATTAAAATGCTACATAAAGCAAAAGGTAATGGCCAAGACTTTATTAGTGAAATTGCAACAATTGGAAGAATACATCATCAAAATGTAGTACAACTAATTGGATATTGTGTTGAAGGCTCAAAACGTGCCCTTGTTTATGAATTCATGCCCAATGGATCTCTTGACAAATTTATTTTTCCCAAAGATGGAAATATACATTTAACATATGACGAAATATATAATATAGCAATTGGAGTAGCTCGTGGGATTGCTTATCTCCATCATGGGTGCGAGATGAAAATATTGCATTTTGATATCAAACCCCATAACATCCTTCTTGATGAAACATTCACCCCAAAGGTCTCTGACTTTGGATTGGCAAAACTATATCCAATAGATAATAGCATTGTGACTAGGACAGAGGCAAGAGGGACAATTGGATATATGGCTCCAGAATTATTTTATGGAAATATTGGAGGAATATCCCACAAGGCTGATGTTTATAGCTTTGGGATGCTTTTGATAGATATGACAAATAAGAGGAAGAACCCAAATCCCCATGCAGATGATCATTCAAGTCAACTTTACTTTCCTACTTGGATTTATAATCAACTTGAAAAAGAGACAGATATAGAAATGGAAGGTGTCACAGAGGAGGAAAAGAAGATGATCATTGTTTCACTTTGGTGTATACAGTTGAAACCAAGCGATCGCCCCTCAATGAACAAAGTAGTGGAAATGCTTGAAGGAGATATTGAAAGCCTAGAAATACCTCCAAAGCCTTCTCTATATCCACATGATACAATGGAAAATGATCAAAGCATCTACTCTAGTCAAACAATGTCAACGGACTTCATTAGTTCTTCTAGTTATTCCAAGGAAATTGTGACTAATCCTTTGGTAGAGGATGTTATTTGA | 2043 | 0.3882 | MWRQSALLVFVLLLVQQICATSEQEHACPPSSCGKITHITYPFRLTGDPKGCGDKWYELACENNVTVLYLYSGKYHVQAINYNNFTIRVVDPGVQQPYCSSIPRYFLSQSNFSAIDEGDPYLAFQNRDYSWEYVFQHIVFLNCRHAVIDNEKYVETDPCIKWHSKGYIYAIAGDLIAKDFEVGCEVKLVAPTSLWGLDTYTQMHRALIYGFELSWMNLACEDYCGNPSCTFNSSSQMLECSSLRVCRNFVVGWQYLTQCEAGTNVLRGLFEIIRGPNPELEHKLDAYVSLFVIFGHYILPFLASKFLFGMTLFIVLLIYKWRKRHLSIYENIENYLEQNNLMPIGYSYKEIKKMARGFKEKLGGGGYGFVFKGKLRSGPSVAIKMLHKAKGNGQDFISEIATIGRIHHQNVVQLIGYCVEGSKRALVYEFMPNGSLDKFIFPKDGNIHLTYDEIYNIAIGVARGIAYLHHGCEMKILHFDIKPHNILLDETFTPKVSDFGLAKLYPIDNSIVTRTEARGTIGYMAPELFYGNIGGISHKADVYSFGMLLIDMTNKRKNPNPHADDHSSQLYFPTWIYNQLEKETDIEMEGVTEEEKKMIIVSLWCIQLKPSDRPSMNKVVEMLEGDIESLEIPPKPSLYPHDTMENDQSIYSSQTMSTDFISSSSYSKEIVTNPLVEDVI* | 681 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso13g0178 | 680 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 476 | 488 | IPR008271 | GO:0004672|GO:0006468 | |
Gso13g0178 | 680 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 6 | 654 | IPR045874 | GO:0004672 | |
Gso13g0178 | 680 | ProSiteProfiles | Protein kinase domain profile. | 356 | 638 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso13g0178 | 680 | Gene3D | Transferase(Phosphotransferase) domain 1 | 431 | 631 | - | - | |
Gso13g0178 | 680 | Gene3D | Phosphorylase Kinase; domain 1 | 331 | 430 | - | - | |
Gso13g0178 | 680 | ProSitePatterns | Protein kinases ATP-binding region signature. | 362 | 384 | IPR017441 | GO:0005524 | |
Gso13g0178 | 680 | Pfam | Protein tyrosine and serine/threonine kinase | 358 | 623 | IPR001245 | GO:0004672|GO:0006468 | |
Gso13g0178 | 680 | Pfam | Wall-associated receptor kinase galacturonan-binding | 28 | 91 | IPR025287 | GO:0030247 | |
Gso13g0178 | 680 | SUPERFAMILY | Protein kinase-like (PK-like) | 347 | 662 | IPR011009 | - | |
Gso13g0178 | 680 | PANTHER | STRESS-INDUCED RECEPTOR-LIKE KINASE | 6 | 654 | - | - | |
Gso13g0178 | 680 | SMART | serkin_6 | 356 | 623 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso13g0178 | Gso-Chr13 | 10515323 | 10519103 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso13g0178 | 12 | 665 | Receptor kinase-like Gene Family | AT5G38260 | 34.412 | 1.68e-111 | 348 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Gso13g0178 | PK_Tyr_Ser-Thr | 4.7e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso13g0178 | - | - | gmx:100792548 | 1379.77 |