Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0163 ATGCCTAATGGCAGCCTCATTTATCAATTGTCTCTTGCTGGGGCTAATAGGCTAACGTGGCCACAAAGAAAGAACATAATCCTTGATGTGGCTAAGGGGCTTGCTTATTTGCATTATGAAATCAAACCCCCAATTTATCACCGTGACATAAAGGCTACCAACATACTTTTGGATTCCAAAATGAATGCTAAATTGGCGGATTTTAGCTTGGCCAAACAAGGTAGTGAAATCCAATCTCATCTCACCACAAGGGTTGCTGGCACATATGGTTACTTGGCACCAAAGTATGCTCTTTATGGACAACTAACAGAGAAGAGTGATGTATACAGTTTTGGTATTGTCATCCTGGAAACCATAAGTAGTAGAAAAGTGTTTGATAATCTGAATTCATCTATGGATTCAATCACAGATTGGGTATGGACACTTGTGGAATCAGGAATGATGGATGAGATTTTGGACGAGTCAATAAAGAGGTGA 477 0.3983 MPNGSLIYQLSLAGANRLTWPQRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKMNAKLADFSLAKQGSEIQSHLTTRVAGTYGYLAPKYALYGQLTEKSDVYSFGIVILETISSRKVFDNLNSSMDSITDWVWTLVESGMMDEILDESIKR* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0163 158 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 1 156 - -
Gso13g0163 158 PANTHER OS01G0253100 PROTEIN 1 156 IPR045271 GO:0004714|GO:0006468
Gso13g0163 158 ProSitePatterns Serine/Threonine protein kinases active-site signature. 45 57 IPR008271 GO:0004672|GO:0006468
Gso13g0163 158 Gene3D Transferase(Phosphotransferase) domain 1 1 158 - -
Gso13g0163 158 ProSiteProfiles Protein kinase domain profile. 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g0163 158 SMART serkin_6 1 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g0163 158 SUPERFAMILY Protein kinase-like (PK-like) 1 146 IPR011009 -
Gso13g0163 158 Pfam Protein kinase domain 16 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0163 Gso-Chr13 10241138 10241614 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0163 1 158 Receptor kinase-like Gene Family AT1G11050 62.805 1.32e-63 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Gso13g0163 Pkinase 1.3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0163 - - gmx:100799953 315.849