Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0147 ATGTCGTCGACGCCGCAGGACTCTGTCAAAACGACGGCGTCGGCGAAGAACACCGCGTTCGACGCGGAAGCGGCGTCGCGGCTCGTGAATGAGCTTAGGCGAAACTTCGCTTCGAACAAAACGCGCAGTTACGAGTGGAGACTGTCGCAGCTCAACGCGCTCGAGAAACTCGTCGTCGTTCACGAGCAGGAGATCGTCGACGCGCTCCGAAACGACCTCGGCAAGCCGCCACTCGAAACCGTTGCATACGAGATTGCTATGTTGAAAAACTCATGTAGAATCGCACTCAAGGAATTGAAACATTGGATGACTCCTGAAAAGGTCAAAACTTCAATCGCAACTTTTCCTTCTTCAGCTGAAATAGTATCTGAACCACTGGGGGTTGTGTTAGTCATCTCTGCATGGAACTACCCATTCTTGTTGTCACTTGATCCAGTCGTTGGAGCTATTGCAGCTGGTAATGCTGTTGTTTTAAAACCATCAGAAATTGCTCCTGCCACATCATCACTGCTGGCAAAGCTTATCGGAGACTACTTGGATAACTCATGTATTAGAGTTGTTGAGGGAGCAGTTGATGAAACATCTGCATTACTGCAGCAAAAGTGGGACAAAATTTTCTATACAGGTAATGGACGAGTGGCACGCATTGTGATGGCTGCTGCTTCAAAACACCTAACACCAGTTGTGCTGGAGCTTGGAGGAAAATCTCCAGTTGTTGTTGATTCAAATATCAATTTAAAGGTAGCAACAAGACGAATAATTGCAGGAAAGTGGGGTTCTAATAATGGGCAAGCCTGCATTTCTCCAGATTATATTATAACAACTAAAGACTATGCTCCCAAGTTGGTGGATGCGCTAAAGACTGAATTGGAGAAATTTTATGGAAAGAACCCATTGGAATCAAAAGATTTGTCCCGTGTTGTGAACTCCAACCACTTTAATCGGTTGACAAAGCTCTTGGATGATGATAAGGTTTCTGGTAAGATTGTTTATGGAGGCCAAAAGGATGAAAACAAATTGAAGATTAGCCCCACTGTTCTATTGGATGTCCCACGGGACTCTTTGATTATGAATGAGGAGATATTTGGTCCTTTACTTCCCATCCTCACGGTTGACAAACTAGAAGAAAGCTTTGACGTGATCAATTCAGGACCCAAGCCTCTCGCTGCATATATATTTACAAATAACAAGAAGCTCAAGGAGCAATTTGTTATGACTATTTCAGCTGGTGGTTTGGTTGTTAATGACACTACTTTACATCTTGCAGTTCATACTTTACCATTTGGTGGAGTTGGTGAGAGTGGAGTGGGTGCATACCATGGGAAATTCTCATTTGAAGCTTTTAGCCACAAAAAAGCTGTTCTCTATCGCAAATTTATTGGTGATGCTCCAGTAAGGTACCCACCATACACAAATACAAAGATGAGATTGCTGAAAGCTATCATAGGTGGTGGCATACATGGTATTGTTCGTGCCCTGTTTGGTTGGTGA 1491 0.44 MSSTPQDSVKTTASAKNTAFDAEAASRLVNELRRNFASNKTRSYEWRLSQLNALEKLVVVHEQEIVDALRNDLGKPPLETVAYEIAMLKNSCRIALKELKHWMTPEKVKTSIATFPSSAEIVSEPLGVVLVISAWNYPFLLSLDPVVGAIAAGNAVVLKPSEIAPATSSLLAKLIGDYLDNSCIRVVEGAVDETSALLQQKWDKIFYTGNGRVARIVMAAASKHLTPVVLELGGKSPVVVDSNINLKVATRRIIAGKWGSNNGQACISPDYIITTKDYAPKLVDALKTELEKFYGKNPLESKDLSRVVNSNHFNRLTKLLDDDKVSGKIVYGGQKDENKLKISPTVLLDVPRDSLIMNEEIFGPLLPILTVDKLEESFDVINSGPKPLAAYIFTNNKKLKEQFVMTISAGGLVVNDTTLHLAVHTLPFGGVGESGVGAYHGKFSFEAFSHKKAVLYRKFIGDAPVRYPPYTNTKMRLLKAIIGGGIHGIVRALFGW* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0147 496 SUPERFAMILY ALDH-like 27 470 IPR016161 GO:0016491
Gso13g0147 496 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 33 452 IPR016162 GO:0016491
Gso13g0147 496 PANTHER ALDEHYDE DEHYDROGENASE 13 496 - -
Gso13g0147 496 PANTHER ALDEHYDE DEHYDROGENASE 13 496 IPR012394 GO:0006081
Gso13g0147 496 PIRSF ALDH 7 487 IPR012394 GO:0006081
Gso13g0147 496 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 230 237 IPR029510 GO:0016491
Gso13g0147 496 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 234 434 IPR016163 GO:0016620
Gso13g0147 496 Coils Coil 51 71 - -
Gso13g0147 496 Pfam Aldehyde dehydrogenase family 13 454 IPR015590 GO:0016491
Gso13g0147 496 CDD ALDH_F3FHI 25 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0147 Gso-Chr13 9974903 9981573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0147 85 495 Aldehyde Dehydrogenase Gene Family AT1G44170 74.209 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0147 K00128 - gmx:100816594 972.615