Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0140 ATGAATTTCCCAAAAAGCCCTCAACCCAGACCCTCATCTCCTTCCTCTTCCTACATTCCACCCCACCGTACCCAACTGCACCCTCGCATGATCTCTCTCTATTCTTCTTCTTCCCCAAATCCAAATCCCAACAACAAACCCCACACCACCAGATGCCTCTTGTTTTTCTTCGCCCTCCTCTTCTTCACCGCCCCCTTCCTCTTCTACCTCTTCTCCACCGCCCTCCAAATCCACTCCTCCCCAAAATTCGCCGACTCCCGCCCCGCCTCCTTCGCCCTCGCCCTCCGCGCCGGCCCCCACGCCCTCCGCCTCTCTGTCTTCCACTTCCTCGGCCCCGCCCGTGCCCTCCTCGCCGCCGCTCACTCCGCCGCCGCCTCCCCCGGCTTCGACGCCGGCCCTGACGCCCTCCGCGGCACCGTTGCGGAGCTCATCAAGTTTGCCAAGGGGAGGGTGCCCAGGAGGGAATGGGGCAACACCGTGGTGCGGCTGGACGCCACTGAGGAGGTTGAGGGGCTGGGCGTCAAGGAAGCGGAGAAGGTTCTGGAATGTTTCAGACAGGCTTTGAGGGTGTCCGGGTTCTTGTTCAAGGATGAATGGGCACGAGTAATTTCGGGGGAAGAACAAGGCATCTCTTCTTGGGTTGCTGTAAATTATGCTCTTGGAAACTTGGGACGAGAGGCTCAAGAAACAACTGGAATAGTTGAACTTGGTGGGGCTTCTTTGCAGGTTACATCAGCTAAACTTAATGCAGATTTAGCTCAGTCTTTGCGAACTATAAGATTGTCTGGGGTTACGTACAACCTTTACACTCAGAGTTGGCCCCAACTGGGTCAGGATGTGGTATGGAAATCATTAGAGGAGGGACTGAAATATAGAGAGTTGAAGCTTTCTTCAAAATCTAGCAAAAGAAATATAATTAATCCTTGCATTCCTAGAGGGTATGAGTATCCTCAGATCACCAATGCAAGTGATGTAAAACACCCAATCTTCCAACCAGCTGGAAATTTCTCAGCATGCAGGTCCAAAGCTGTGTCATTGTTAAAGAGAACAGAAGATAGATGCCTGCATCCACCTTGTAAAATTACTTCTTCCTTTTATGAGTTATTAGGTGAACAAGTTTCAAAAAGCTTCTTGTATACTTCTGAGATTCTTAGGATGGCTCCTAGGACTTCTTTGTTTCAATTGGAGGCAGAGGGCCGACATTATTGTGAAGATCATTGGGATGCTCTTAAAGATCTGCATAATGAAGTTGATTATATGGATTTATTGAAGTATTGTTTCTCTTCTGCGTATATGCTGGCATTATTGCATGATGTTCTTGGGATTGCTATGGAAGAGAAAAGGGTTGGATTTGGGAACCGGAAGATTAACAGTGATGTTGATTGGACACTTGGATCTTTCATAACTGAAACAATGGCAGAACCCCTTGAATTGGAACATTTAGATACAGGGATGATTGTTGGGAATGAATCAGTCACATATTTTTCATTATTTGCATTTCTTTTCTTATTCATGCTTGCTGCATTCTTTGTACTGCAATGGAGAAAGCCACAATTGAAGACAGTATATGACCTTGAGAAGGGACGCTATATTGTTACACGTATACCCAGATGTGGGAGAGGGAAGGCGAAAGAGAAGCCTTAA 1644 0.4781 MNFPKSPQPRPSSPSSSYIPPHRTQLHPRMISLYSSSSPNPNPNNKPHTTRCLLFFFALLFFTAPFLFYLFSTALQIHSSPKFADSRPASFALALRAGPHALRLSVFHFLGPARALLAAAHSAAASPGFDAGPDALRGTVAELIKFAKGRVPRREWGNTVVRLDATEEVEGLGVKEAEKVLECFRQALRVSGFLFKDEWARVISGEEQGISSWVAVNYALGNLGREAQETTGIVELGGASLQVTSAKLNADLAQSLRTIRLSGVTYNLYTQSWPQLGQDVVWKSLEEGLKYRELKLSSKSSKRNIINPCIPRGYEYPQITNASDVKHPIFQPAGNFSACRSKAVSLLKRTEDRCLHPPCKITSSFYELLGEQVSKSFLYTSEILRMAPRTSLFQLEAEGRHYCEDHWDALKDLHNEVDYMDLLKYCFSSAYMLALLHDVLGIAMEEKRVGFGNRKINSDVDWTLGSFITETMAEPLELEHLDTGMIVGNESVTYFSLFAFLFLFMLAAFFVLQWRKPQLKTVYDLEKGRYIVTRIPRCGRGKAKEKP* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0140 547 MobiDBLite consensus disorder prediction 1 20 - -
Gso13g0140 547 Pfam GDA1/CD39 (nucleoside phosphatase) family 91 476 IPR000407 GO:0016787
Gso13g0140 547 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 15 533 IPR000407 GO:0016787
Gso13g0140 547 Gene3D Exopolyphosphatase. Domain 2 204 458 - -
Gso13g0140 547 MobiDBLite consensus disorder prediction 1 16 - -
Gso13g0140 547 Gene3D - 129 465 - -
Gso13g0140 547 PANTHER APYRASE 6-RELATED 15 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0140 Gso-Chr13 8928644 8939274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0140 127 475 Calmodulin-binding Proteins AT3G04080 25.858 1.26e-21 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0140 K01510 - gmx:100806446 991.875