Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0134 ATGTCCAAAGATCACAGGCCATTATGCATTAAGGAAAGAAAGAGGATAAAGTCTCTAGGTGGATACATAGATAATGGTTACTTGAACAGCCAGTTAGGTGTGACTCATGCACTAGGCAACTGGAATCTCCAAGGAATGAAGGAAATTAATGGAATGGGTGGACCATTTAGTGCTGAGTCTAAACTTAAGTTAATCACATTGACAAAAGAAGATGAATTTTTCATAATTGGGAGTGATGGGATCTGGGATGTTTTTCACAGCCAAAATGCCATACACTTTGCTCGAAGGAGTCTTCAAGAGCATAACGATGTGAAGCAGTGTTGCGAGGAGGTGATAGGGGAAGCAATAAAGAGAGGAGCAACAGACAACTTAACAGTGGTGATGATATCATTGACTAAGACTGTTTAG 408 0.402 MSKDHRPLCIKERKRIKSLGGYIDNGYLNSQLGVTHALGNWNLQGMKEINGMGGPFSAESKLKLITLTKEDEFFIIGSDGIWDVFHSQNAIHFARRSLQEHNDVKQCCEEVIGEAIKRGATDNLTVVMISLTKTV* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0134 135 ProSiteProfiles PPM-type phosphatase domain profile. 1 131 IPR001932 -
Gso13g0134 135 Gene3D - 1 134 IPR036457 -
Gso13g0134 135 PANTHER PROTEIN PHOSPHATASE 2C 1 132 IPR015655 GO:0004722|GO:0006470
Gso13g0134 135 CDD PP2Cc 1 131 IPR001932 -
Gso13g0134 135 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 132 - -
Gso13g0134 135 Pfam Protein phosphatase 2C 1 123 IPR001932 -
Gso13g0134 135 SUPERFAMILY PP2C-like 1 131 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0134 Gso-Chr13 8393383 8393790 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0134 1 131 PP2C-type Phosphatase Gene Family AT2G25620 52.632 5.31e-46 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0134 K14803 - gmx:100802607 276.174