Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0132 ATGAAGAAGTTTTCTCTTTATGCTTGTATGCTCAATTTGAGTATCTTGATTCTTCTTCCCTATAGCAAAGCCAGTCAGGCTGATAAACTTCAGGAGTTGATTCTGTCTAAGAGCTCACAGAAGCCTCCAGTGACCCTTTCATGGGCAGAGGAAGACGCAGTGAAAACTCCTTCTCCTGCTTATGTTGCACCCCAAGAGGGTCAAAAGGAAGCTGACAGAATTGTGGCACTGCCTGGCCAGCCCTATGGTGTGAATTTTGACCAATATTCAGGCTATGTCACTGTTGATCCAAAGGCTGGAAGAGCACTTTTCTATTATTTTGTGGAGTCTCCATATAACCCTTCAACAAAACCTTTAGTATTGTGGCTAAATGGAGGACCTGGTTGTTCCTCATTGGGGTACGGTGCCTTTGAGGAATTGGGACCTTTCAGAATAAACTCTGATGGTGAAACACTCTATCGTAACAAATATGCTTGGAATGAAGTGGCAAATGTGCTGTTCTTGGAATCCCCTGCTGGAGTGGGCTTTTCCTACTCCAACACTACTTCTGACTATGGTCATTCAGGAGATAAGTCTACTGCAAAAGATGCATATGTTTTCCTGATCAATTGGCTAGAGAGATTTCCAGAGTACAAAACCCGCGATTTTTACATAACTGGAGAGAGCTATGCTGGACATTATGTGCCTCAGCTTGCATACACTATTCTGGTGAACAATAAATTCAGTCAACAAAAGATTAAACTCAAAGGCATTGCTATAGGGAATGCTTGGATTGATGATGTTGCAAGTATAAAGGGGATATATGATTACATATGGACTCATGCTTTGAGCTCAGATCAAACACATGAGCTGATTGAGAAGTACTGCGATGTCACTTCTGAAAACGTTTCAGCTATGTGTGTCAATGCAACAAGAACGGCTGCTATTGAGATCGGAAACATTGACGATTATAACATCTATGCACCACTGTGTCACGATTCTTCTCTCAAAAATGGATCTGCTGGCTCTGTCTATGATTTTGACCCGTGTTCTGATTACTACGGGGAAGCCTATCTAAATAGACCAGAGGTGCAACTAGCTCTTCATGCAAAACCCACAAACTGGGCACATTGCAGTGATTTAATAAACTGGAAGGACAGCCCAGCTACCATCTTGCCGGTCATCAAGTATCTCATTGACAGTGACATTGGATTGTGGATATACAGTGGTGATACTGATTCAGTGGTTCCAGTCACATCTTCCAGATATTCAATCAACACCCTCAAGCTCCCTATCCAGGTTCCTTGGCGTCCATGGTATTCTGGAAATGAGGTTGGAGGATATGTGGTTAAGTACAAAGGAGTGACATTTGTTACAGTAAGAGGAGCAGGACATCTAGTTCCAAGCTGGCAACCATCACGGGCTCTGACTTTGATCTTCTCATTCCTCTATGGAAGCCTGCCTCCTGCATCACCATGGAAGGGTTTCTAG 1470 0.432 MKKFSLYACMLNLSILILLPYSKASQADKLQELILSKSSQKPPVTLSWAEEDAVKTPSPAYVAPQEGQKEADRIVALPGQPYGVNFDQYSGYVTVDPKAGRALFYYFVESPYNPSTKPLVLWLNGGPGCSSLGYGAFEELGPFRINSDGETLYRNKYAWNEVANVLFLESPAGVGFSYSNTTSDYGHSGDKSTAKDAYVFLINWLERFPEYKTRDFYITGESYAGHYVPQLAYTILVNNKFSQQKIKLKGIAIGNAWIDDVASIKGIYDYIWTHALSSDQTHELIEKYCDVTSENVSAMCVNATRTAAIEIGNIDDYNIYAPLCHDSSLKNGSAGSVYDFDPCSDYYGEAYLNRPEVQLALHAKPTNWAHCSDLINWKDSPATILPVIKYLIDSDIGLWIYSGDTDSVVPVTSSRYSINTLKLPIQVPWRPWYSGNEVGGYVVKYKGVTFVTVRGAGHLVPSWQPSRALTLIFSFLYGSLPPASPWKGF* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0132 489 ProSitePatterns Serine carboxypeptidases, serine active site. 218 225 IPR018202 GO:0004185
Gso13g0132 489 Pfam Serine carboxypeptidase 78 476 IPR001563 GO:0004185|GO:0006508
Gso13g0132 489 PANTHER CARBOXYPEPTIDASE 18 483 - -
Gso13g0132 489 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 483 IPR001563 GO:0004185|GO:0006508
Gso13g0132 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 167 IPR001563 GO:0004185|GO:0006508
Gso13g0132 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 178 IPR001563 GO:0004185|GO:0006508
Gso13g0132 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 204 229 IPR001563 GO:0004185|GO:0006508
Gso13g0132 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 448 461 IPR001563 GO:0004185|GO:0006508
Gso13g0132 489 ProSitePatterns Serine carboxypeptidases, histidine active site. 448 465 IPR033124 GO:0004185
Gso13g0132 489 SUPERFAMILY alpha/beta-Hydrolases 74 478 IPR029058 -
Gso13g0132 489 Gene3D - 384 478 - -
Gso13g0132 489 Gene3D alpha/beta hydrolase 68 326 IPR029058 -
Gso13g0132 489 Gene3D - 343 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0132 Gso-Chr13 7839302 7850397 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0132 340 479 Calmodulin-binding Proteins AT2G22960 28.859 1.18e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0132 K16297 - gmx:100807212 1003.05