Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0130 ATGAAGAAACTTTCTCTGCATGCTTGTTTTCTCAATTTGAGCCTCTTGGTTCTTCTTCCCTATAGCAAAGCCAGCCAGGCTGACAAACTTGAAGAGTTGATTCTATCTAGGAGTTCACAGAAGCCTCCAGTGACCCTTTCTTGGGCAGAGGAAGATGCATTGAAAACTCATTCTTCTGCTTATGTTGCATCCCAAGAGGGGCAAAAGCAAGCTGACAAGATTGCGGCATTGCCTGGCCAACCCTATGGGGTGAATTTTGACCAATATTCCGGCTATGTCACTGTTGATCCAAAGGCTGGAAGAGCACTTTTCTATTATTTTGTGGAATCTCCATATAACCCTTCAACTAAACCTTTAGTTTTGTGGCTAAATGGAGGACCTGGTTGTTCCTCATTGGGGTATGGTGCCTTTGAGGAATTGGGACCTTTCAGAATAAACTCCGATGGCAAAACACTATATCGCAACAAATATGCTTGGAATGAAGTGGCAAATGTGCTGTTCTTGGAATCCCCTGCTGGGGTGGGCTTTTCCTACTCAAACACTACTTCTGACTATGATCATTCAGGAGATAAGCCTACTGCAAAAGATGCATATGTTTTCCTGATCAATTGGTTAGAGAGGTTTCCAGAGTACAAAACCCGCAATTTTTACATAACTGGAGAAAGCTATGCCGGACATTATGTGCCTCAGCTTGCATACACTATTTTGGTGAACAATAAATTCAGTCAACAAAATATTAACCTCAAAGGCATTGCTATAGGGAACGCTTGGATTGATGATGTTACAGGTACAAAGGGGATAGTTGATTACTTATGGACTCATGCTTTGAACTCGGATCAAACACATGAGTTGATTGAGAAGTACTGCGATTACAGTTCTGAAAACATTTCGCAAATATGTTCCAATGCAACAAGAAGGGCATTAACTGAAAAAGGAAACATAGACTTTTATAACATCTATGCTCCACTGTGTCATGACTCTTCTCTCAAAAATGAATCATCATCTGGTTCTGTATATGATTTTGACCCGTGTTCTGATTACTACGGGGAAGCCTATCTAAATAGGCCAGAGGTCCAACTAGCTCTTCATGCAAAACCCACAAACTGGTCCCATTGCAGTGATTTAATAGACTGGAACGACAGCCCAACTACCATCCTACCTGTCATCAAGTATCTCACCGACAGTAACATTGTATTGTGGATATACAGTGGTGATACGGATGCAAGGGTGCCAGTTACATCTTCCAGATATGCAATCAACACCCTCAAGCTACCTATCCAGGTTCCTTGGCGTCCATGGTATTCTGGAAATGAGGTTGGAGGATATGTGGTGAAATACAAAGGAGTGACATTTGTTACAGTAAGAGGAGCAGGACATCTGGTTCCTAGCTGGCAACCAGCACGGGCTTTGACCTTGATCTTCTCATTCCTCTACGGAAGCCTGCCTCCTGCTTCACCATGGAAGGGTTACTAA 1473 0.427 MKKLSLHACFLNLSLLVLLPYSKASQADKLEELILSRSSQKPPVTLSWAEEDALKTHSSAYVASQEGQKQADKIAALPGQPYGVNFDQYSGYVTVDPKAGRALFYYFVESPYNPSTKPLVLWLNGGPGCSSLGYGAFEELGPFRINSDGKTLYRNKYAWNEVANVLFLESPAGVGFSYSNTTSDYDHSGDKPTAKDAYVFLINWLERFPEYKTRNFYITGESYAGHYVPQLAYTILVNNKFSQQNINLKGIAIGNAWIDDVTGTKGIVDYLWTHALNSDQTHELIEKYCDYSSENISQICSNATRRALTEKGNIDFYNIYAPLCHDSSLKNESSSGSVYDFDPCSDYYGEAYLNRPEVQLALHAKPTNWSHCSDLIDWNDSPTTILPVIKYLTDSNIVLWIYSGDTDARVPVTSSRYAINTLKLPIQVPWRPWYSGNEVGGYVVKYKGVTFVTVRGAGHLVPSWQPARALTLIFSFLYGSLPPASPWKGY* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0130 490 SUPERFAMILY alpha/beta-Hydrolases 75 479 IPR029058 -
Gso13g0130 490 Gene3D - 385 479 - -
Gso13g0130 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 167 IPR001563 GO:0004185|GO:0006508
Gso13g0130 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 178 IPR001563 GO:0004185|GO:0006508
Gso13g0130 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 204 229 IPR001563 GO:0004185|GO:0006508
Gso13g0130 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 449 462 IPR001563 GO:0004185|GO:0006508
Gso13g0130 490 ProSitePatterns Serine carboxypeptidases, serine active site. 218 225 IPR018202 GO:0004185
Gso13g0130 490 Pfam Serine carboxypeptidase 78 477 IPR001563 GO:0004185|GO:0006508
Gso13g0130 490 ProSitePatterns Serine carboxypeptidases, histidine active site. 449 466 IPR033124 GO:0004185
Gso13g0130 490 Gene3D alpha/beta hydrolase 68 326 IPR029058 -
Gso13g0130 490 Gene3D - 344 377 - -
Gso13g0130 490 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 484 IPR001563 GO:0004185|GO:0006508
Gso13g0130 490 PANTHER CARBOXYPEPTIDASE 18 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0130 Gso-Chr13 7653862 7658020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0130 330 479 Calmodulin-binding Proteins AT2G22960 27.108 2.24e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0130 K16297 - gmx:100779407 1001.5