Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0099 ATGGTTTTTGTTGATTCTGAGGGTGATCAAATTCATGCTATTTGTAAATCGGACCACCTCAAGTCTTGGAAAACTTATTTGAAAGAGAATTGCACTTATGTTATGCATAATTTCAAAGTTGTTAAGAATGATGGTCAATTTAGAGTGTGCGAACATGAGTACAAGTTATTTTTTATTGGAGTGACGGTTGTTAGAGAAGCTAATTTGCATGAACTGCCTTTTAAGGAATTTGGATTTGTTGAATTTGCAAATGTTGTTGCTGGCAATTTTGTGTCTGGCCTGTTGGTTGATATTATTGGGGTCGTTGATCAAGTGGTCTTTCGGCATGTTTCAACGAAAAATACCAGGGTTGTTTTTAGAATGAAGGATTTGAGTGGTGAAATTTTGTCTTGCACACTTTGGGAGAATTACTGTACTCAGTTCCTATCCTATTTGAATGAACGTGGGGATGATGGGCCGATGGTTATTATATTGACACATGCCAGAATAAAAGATGCACAGGGAAGTTATCCAGCTTCAGTGAGCAATTCCTTCAAGGCGTCAAAACTATTGATTAATGATCCTATATTGGAAATTCAAGAATTTAAAGAGAGGCTTTTAGATTTAGGTGTTGAGGTGAGTCGAGTTTTGCTACCTGGCGATCAAGCAAGCTCACAAGTTTCAGGGGGAAGTCAGCTATCATCAAAGGATTCGTTTCTTTCAAAGGCTGAAGTCAAAACTATTTTAGAAATCAATGCCATTTCTGAGGTGGACCTGAAAACTGACATCCAAACAGGACCATTCACATGTGGATGTGGCAAGGATAATGATCAGCCTGTTCTAAGGTATAGAGTTGAAATCATGGTTACCCAAAACAATGAGAGTGGCAAATTTTTGCTCTGGGACTGTGAATATGCTGAATTCATTGGTCAAACAGCTGATGATGTGAATAGGGTCAAGATTGAAGATGGTGATCTTGATTTGAATGCTTCCCCTCAAGCACTTGACAAATTGTTGGGTCATGTGCTTGCTTTTAAGGCCAGGATTCAATCAAGATTCAAAAATGCAGTTGTACTTAGATACTCAAAAGACCTGGATTTGATCAATGCAGTTCTGGAGATGCTGCCTGATAGTGAGCAATCTCTGTTTGTCACAGCTGACCATGATCCGGTTGCGGGATTGCCTTTAACACCCAAAAAGCGGATGTCATCTGATGAAGCCGATGATGAGTTAAGGAGCTCTCAAATTTCGCCAGCCCAACTATCGTCTAACAAATTAACAAGACATTCTCATAGGAGCTAA 1281 0.3927 MVFVDSEGDQIHAICKSDHLKSWKTYLKENCTYVMHNFKVVKNDGQFRVCEHEYKLFFIGVTVVREANLHELPFKEFGFVEFANVVAGNFVSGLLVDIIGVVDQVVFRHVSTKNTRVVFRMKDLSGEILSCTLWENYCTQFLSYLNERGDDGPMVIILTHARIKDAQGSYPASVSNSFKASKLLINDPILEIQEFKERLLDLGVEVSRVLLPGDQASSQVSGGSQLSSKDSFLSKAEVKTILEINAISEVDLKTDIQTGPFTCGCGKDNDQPVLRYRVEIMVTQNNESGKFLLWDCEYAEFIGQTADDVNRVKIEDGDLDLNASPQALDKLLGHVLAFKARIQSRFKNAVVLRYSKDLDLINAVLEMLPDSEQSLFVTADHDPVAGLPLTPKKRMSSDEADDELRSSQISPAQLSSNKLTRHSHRS* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0099 426 Gene3D - 1 66 IPR012340 -
Gso13g0099 426 SUPERFAMILY Nucleic acid-binding proteins 1 66 IPR012340 -
Gso13g0099 426 Gene3D - 71 205 IPR012340 -
Gso13g0099 426 SUPERFAMILY Nucleic acid-binding proteins 77 199 IPR012340 -
Gso13g0099 426 Pfam Domain of unknown function DUF223 1 87 IPR003871 -
Gso13g0099 426 MobiDBLite consensus disorder prediction 385 426 - -
Gso13g0099 426 CDD RPA1_DBD_B_like 97 199 - -
Gso13g0099 426 PANTHER RPA1 DOMAIN PROTEIN, PUTATIVE-RELATED 16 301 - -
Gso13g0099 426 PANTHER REPLICATION FACTOR A 1, RFA1 16 301 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gso13g0099 426 CDD RPA1_DBD_A_like 1 64 - -
Gso13g0099 426 Gene3D - 226 364 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0099 Gso-Chr13 4049458 4051848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0099 3 320 Core DNA Replication Machinery Family AT5G08020 22.159 9.82e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0099 - - gmx:121173258 843.958