Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0055 ATGTTAGGATTTGACGATGGTGATTCTGATTCCGACAACGAGCAGGCACTGTTTGGGAAGTACCCGGAGCTACAGATGTTTAAGTGGGAGAACAGTCTCATTCACCTTCCTTCCAATTTATCATCTTTGTTATTGCCGCAGACACCACTGTTTCACTGTGAGCGTGAAGAAACCCTCAGGGTTCACCCTCCTCCCTTTCTTCCGTTGCAAGAAACCCTCGATCATCTGTCAGCGAACACTGCCCCTACTCAGGACATCACCCATCTTCAACAGGCACGCCCAGCGAACCCACCCCCCACTTCATCACCATCTCCCAATCTCTGCAAGAGATGGACCAATGAAGAACACAGGCTGTTTCTTGAAGGGCTTGCCTACTTTGGCAAGGGTGATTGGAAGAACATCTCAAAACATGCTGTTAAGACAAGAACCAAGACTCAACACATGGCCATTGGTGGTGATAATAGGGATTGA 471 0.4841 MLGFDDGDSDSDNEQALFGKYPELQMFKWENSLIHLPSNLSSLLLPQTPLFHCEREETLRVHPPPFLPLQETLDHLSANTAPTQDITHLQQARPANPPPTSSPSPNLCKRWTNEEHRLFLEGLAYFGKGDWKNISKHAVKTRTKTQHMAIGGDNRD* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0055 156 SUPERFAMILY Homeodomain-like 110 146 IPR009057 -
Gso13g0055 156 Pfam Myb-like DNA-binding domain 109 146 IPR001005 -
Gso13g0055 156 ProSiteProfiles SANT domain profile. 106 146 IPR017884 -
Gso13g0055 156 PANTHER TRANSCRIPTION FACTOR KUA1 8 146 - -
Gso13g0055 156 Gene3D - 110 148 - -
Gso13g0055 156 CDD SANT 110 146 IPR001005 -
Gso13g0055 156 ProSiteProfiles Myb-like domain profile. 110 146 IPR001005 -
Gso13g0055 156 PANTHER TRANSCRIPTION FACTOR MYB1R1-LIKE 8 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0055 Gso-Chr13 2036596 2037514 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso13g0055 Myb_DNA-binding 1.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0055 - - gsj:114382676 273.478