Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0053 ATGTTAGGATTTGACGATGGTGATTCTGATTCCGACAACGAGCAGGCACTGTTTGGGAAGTACCCGGAGCTACAGATGTTTAAGTGGGAGAACAGTCTCATTCACCTTCCTTCCAATTTATCATCTTTGTTATTGCCGCAGACACCACTGTTTCACTGTGAGCGTGAAGAAACCCTCAGGGTTCACCCTCCTCCCTTTCTTCCGTTGCAAGAAACCCTCGATCATCTGTCAGCGAACACTGCCCCTACTCAGGACATCACCCATCTTCAACAGGCACGCCCAGCGAACCCACCCCCCACTTCATCACCATCTCCCAATCTCTGCAAGAGATGGACCAATGAAGAACACAGGCTGTTTCTTGAAGGGCTTGCCTACTTTGGCAAGGGTGATTGGAAGAACATCTCAAAACATGCTGTTAAGACAAGAACCAAGACTCAAGTGACTCTGGTGAGGATGGTTTGTTCACTGGAAGCAAAGTGCACGGCGTCTTGA 492 0.4898 MLGFDDGDSDSDNEQALFGKYPELQMFKWENSLIHLPSNLSSLLLPQTPLFHCEREETLRVHPPPFLPLQETLDHLSANTAPTQDITHLQQARPANPPPTSSPSPNLCKRWTNEEHRLFLEGLAYFGKGDWKNISKHAVKTRTKTQVTLVRMVCSLEAKCTAS* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0053 163 SMART sant 107 159 IPR001005 -
Gso13g0053 163 PANTHER TRANSCRIPTION FACTOR MYB1R1-LIKE 8 147 - -
Gso13g0053 163 Gene3D - 110 150 - -
Gso13g0053 163 ProSiteProfiles SANT domain profile. 106 147 IPR017884 -
Gso13g0053 163 Pfam Myb-like DNA-binding domain 109 147 IPR001005 -
Gso13g0053 163 CDD SANT 110 147 IPR001005 -
Gso13g0053 163 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 110 147 IPR017930 -
Gso13g0053 163 ProSiteProfiles Myb-like domain profile. 110 147 IPR001005 -
Gso13g0053 163 PANTHER TRANSCRIPTION FACTOR KUA1 8 147 - -
Gso13g0053 163 SUPERFAMILY Homeodomain-like 110 147 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0053 Gso-Chr13 2003797 2006649 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso13g0053 Myb_DNA-binding 3.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0053 - - gsj:114382676 305.834