Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0042 ATGAAAAGATTTCATAGTAAAAGAAAACTCTTGATCTTCCTGGTGGTAATCCCAAGCCTAGTCGCTGCCGAGTGCACGTGCGATGAAGAAGACCAAGAGCGAGACAAATCAAAAGCTTTAAGGTACAAAATAGCAGCTTTAATATCAATACTAGTTGCTAGTGCAATCGGGGTGTGTATTCCACTTCTTGGCAAAGTTATACCCGCCTTGAGCCCTGAGAAGAACATATTCTTCATCATTAAGGCCTTTGCCGCAGGTGTGATATTGGCGACCGGTTTTATTCATATCCTACCCGATGCTTTCGAGAACCTTACTTCGCCGTGTTTGAATAAGTATCCATGGGATGCTTTCCCCTTCACTGGCTTTGTGGCAATGTGCACTGCCATGGGGACTCTCATGGTTGAGACTTACGCCACTGCTTATTTTAAAAAACATCATCACTCACAAGTCCAGACAACATACGTGGAAAAGGAGGAATCAGGGGATGTGCATCTTCACACACATGCAACACATGGTCATGCACACGGCCATCTTCCCTCTCATGATCATCAATCATCGGCACTTCTTCGTCATAGGGTCATATCACAGGTGTTGGAGCTAGGAATTATTGTTCATTCTATCATCATTGGAATTTCTATGGGAGCTTCAGAAAGTCCTAAAACAATAAGGCCACTGGTAGCTGCATTGACTTTTCATCAATTTTTTGAAGGCATGGGACTTGGAAGTTGTATAATTCAGGTACCCTCCATTTTTGAATTCATATACATCGGAGATACCGACAAGTTATCATTAGAAAGGCCATTCGACATAGCAAGAGACCCTTCGACAGAGGAGATAGTGTCTGATCCATTCGTGATAGGAATATTTTGGTGCTCACTGTGGGATCGAGTAAGTTATATCCCGACCCCAAGAGGTTATGGCAATAACCAAAATTGGAACGAATACAACTGCAATGGAGCAACCAACAAATTAGCAAAATGA 981 0.4271 MKRFHSKRKLLIFLVVIPSLVAAECTCDEEDQERDKSKALRYKIAALISILVASAIGVCIPLLGKVIPALSPEKNIFFIIKAFAAGVILATGFIHILPDAFENLTSPCLNKYPWDAFPFTGFVAMCTAMGTLMVETYATAYFKKHHHSQVQTTYVEKEESGDVHLHTHATHGHAHGHLPSHDHQSSALLRHRVISQVLELGIIVHSIIIGISMGASESPKTIRPLVAALTFHQFFEGMGLGSCIIQVPSIFEFIYIGDTDKLSLERPFDIARDPSTEEIVSDPFVIGIFWCSLWDRVSYIPTPRGYGNNQNWNEYNCNGATNKLAK* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0042 326 TIGRFAM zip: ZIP zinc/iron transport family 25 247 IPR004698 GO:0005385|GO:0016021|GO:0071577
Gso13g0042 326 PANTHER ZINC/IRON TRANSPORTER 14 246 - -
Gso13g0042 326 PANTHER ZINC TRANSPORTER 1 14 246 - -
Gso13g0042 326 Pfam ZIP Zinc transporter 41 246 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0042 Gso-Chr13 1308330 1313066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0042 4 244 Inorganic Solute Cotransporters AT3G12750 53.175 2.62e-88 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0042 K14709 - gmx:100789557 474.937