Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso13g0028 | ATGAGTCTTCCACAAACTGCAACTAGCCCTCCTCCACATCTGTATCCACAGGAACTTCAGCTGAAGCTTTACCAAACCTTCATATTCTCAATTCCAATACTCTTCTCCATCATTCTCTTTCTCTTGTTTTACTTGTTCTACCTCAAGAGAAGGGCTTCCTCTCTCTCTTCCACTCCTCACTTGCTTCCTAGGACCATTGCCAATCCACCCACCACCTCTCCCTATCATTCCTCACCTTGTCGTTTGGATCTGACCCTCCATTTCCTGGATAAACTTCCAAGAATTTTGTTTGATGAGGATTTGCTAGCAAGGGATTCACTATGTTGTGTATGCCTGGGGGAATTTGAGCTGAAGGAAGAGTTGGTACAGATACCTTATTGCAAGCACGTGTTCCACTTGGAATGCATACATCATTGGCTGCAATCAAACAGCACTTGTCCACTTTGTAGATGTTCCATCATCCCCACTACCAAGTTCCTCAACCCAGCACCGCCTATTAACATTATATCAACAGACCCACCCCAGCAGCATGGTGCTATCATTTCGGACTTCCCATTACAAATTCTATCATTGCCACCTCAGTCACAAGACCATCAAGAAGTTGTTGGTGCTTCCTCAAATGCTGCTAATTTGTCAAGGGAATGA | 645 | 0.445 | MSLPQTATSPPPHLYPQELQLKLYQTFIFSIPILFSIILFLLFYLFYLKRRASSLSSTPHLLPRTIANPPTTSPYHSSPCRLDLTLHFLDKLPRILFDEDLLARDSLCCVCLGEFELKEELVQIPYCKHVFHLECIHHWLQSNSTCPLCRCSIIPTTKFLNPAPPINIISTDPPQQHGAIISDFPLQILSLPPQSQDHQEVVGASSNAANLSRE* | 215 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso13g0028 | 214 | PANTHER | RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING | 3 | 166 | - | - | |
Gso13g0028 | 214 | Pfam | Ring finger domain | 108 | 150 | IPR001841 | - | |
Gso13g0028 | 214 | ProSiteProfiles | Zinc finger RING-type profile. | 108 | 150 | IPR001841 | - | |
Gso13g0028 | 214 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 78 | 155 | IPR013083 | - | |
Gso13g0028 | 214 | MobiDBLite | consensus disorder prediction | 195 | 214 | - | - | |
Gso13g0028 | 214 | SUPERFAMILY | RING/U-box | 87 | 160 | - | - | |
Gso13g0028 | 214 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RHA4A-RELATED | 3 | 166 | - | - | |
Gso13g0028 | 214 | SMART | ring_2 | 108 | 149 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso13g0028 | Gso-Chr13 | 785887 | 788357 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso13g0028 | 1 | 214 | C3H Transcription Factor Family | AT4G10150 | 32.420 | 1.34e-35 | 124 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso13g0028 | K19039 | - | gmx:100813129 | 412.535 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso20g0510 | 20 | 25761550 | 25764000 | Gso13g0028 | 13 | 785887 | 788357 | GST |